Gene Cagg_0896 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_0896 
Symbol 
ID7267968 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp1125330 
End bp1126082 
Gene Length753 bp 
Protein Length250 aa 
Translation table11 
GC content62% 
IMG OID643565744 
ProductCarboxymethylenebutenolidase 
Protein accessionYP_002462251 
Protein GI219847818 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0412] Dienelactone hydrolase and related enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0078373 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000000019377 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
GTGCAACGGC TGAGACGAGT GTTAGGGTGG ATCGGGCTGG TGATCGGGAT CGCTATCGTC 
GGGGTGATAC TGAGTATTCC GCTCGATGCG GTAATCGGAA GTGGGCGGGT GGAGGAGCTA
ACCAATGTTA CGATTCCCGG CCCCGCCGGC CCGATCCGGG CATTTGTTGC CGAGCCGGCC
ACGCCCGGCC CACATCCGGC GGTGATTATG ATCCACGAGT GGTGGGGATT GCGACCCGAC
ATCATCGAAA AAGCGACGGC ACTGGCCGCC GACGGCTACG TGGTGGTCGC CCCCGATACC
TTCCGTGGTG CGAGTACGAC GTGGATCCCA CGCGCGATCC ATCAGGTTTC GACGACACCA
CCCGAACAGG TGCAAGCCGA TCTCGAGGCG GTGTTCGCGT GGCTAACGGC GCGACCCGAT
GTGTTGGCAG ATCGGATCGC CGTGATCGGT TTTTGTTACG GTGGTCGCAC GTCGCTGCTC
TACACACTCC ACAACCCGGC GATTGCAGCA ACCGGTATCT TCTATGGTAT GGCGGAAGTT
GATCCTGAGG CGTTGCGCCA GATTCGCGGC CCGGTGCTGG GCATTTTCGG CGGGGCCGAT
GCCTCTATTC CGCTGAGTGA AGTAGAACGA CTCGAACGCG ATCTGCGTGC CGCCGGAGTG
CCGACGCGCT TTGTCGTCTT TCCCGATCAG CCACACGCTT TTGTTGGTGG CATCGATTCG
ATCAACGCCG GTGGTGCTCC CGGTGAGGCA TGA
 
Protein sequence
MQRLRRVLGW IGLVIGIAIV GVILSIPLDA VIGSGRVEEL TNVTIPGPAG PIRAFVAEPA 
TPGPHPAVIM IHEWWGLRPD IIEKATALAA DGYVVVAPDT FRGASTTWIP RAIHQVSTTP
PEQVQADLEA VFAWLTARPD VLADRIAVIG FCYGGRTSLL YTLHNPAIAA TGIFYGMAEV
DPEALRQIRG PVLGIFGGAD ASIPLSEVER LERDLRAAGV PTRFVVFPDQ PHAFVGGIDS
INAGGAPGEA