| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cagg_0894 |
|---|
| Symbol | |
|---|
| ID | 7267966 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chloroflexus aggregans DSM 9485 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011831 |
|---|
| Strand | - |
|---|
| Start bp | 1122374 |
|---|
| End bp | 1124296 |
|---|
| Gene Length | 1923 bp |
|---|
| Protein Length | 640 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 643565742 |
|---|
| Product | heavy metal translocating P-type ATPase |
|---|
| Protein accession | YP_002462249 |
|---|
| Protein GI | 219847816 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG2217] Cation transport ATPase |
|---|
| TIGRFAM ID | [TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC
[TIGR01512] heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase
[TIGR01525] heavy metal translocating P-type ATPase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 2 |
|---|
| Fosmid unclonability p-value | 0.00000637035 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGACCACCA TTTCTAATAC TGCACCCCGG CAGCGCCTGA CGCTGCTGCT CAACGACGAA
ATCCTCGAGC CGGCCTTTGT CGCTTTGACC CTGATCGGTA TCGTCACCGG TCTGATACTG
GAAGGATCGG GTGCGCCGGA GTCGATCATC TTGGTCGTCC ATCTGGCTAC CTACTTTTTT
GGCGGTTTTT ATGCAGTGCG GGCCATCATC GAGGCCTTAC GCCATTGGTC GATTGAAGTT
GACCTGTTGA TGGTATTGGC AGCGCTCGGT GCGGGCTATT TAGGCGATTT TACCGAAGGT
GCGATTCTGC TCTTTCTCTT TTCGTTGAGC AATGTGTTGC AAGCCTATGC AATGCGGCGT
ACCGAACAGG CGATTACCGC GCTGATGCAG TTGCGCCCGG ATACGGTGAC GGTTCATCGC
GATGGGCGTG AACTCGATCT GCCGATTGAG GCGGTGCAAG TGGGCGATGT GATAGTGCTT
CGCCCCGGTG ACCGGGTGCC GCTCGACGGT GTGATCGAAC GGGGGAGCGG TTCGTTTGAC
GAATCGGCGT TGACCGGCGA GTCGATGCCG GTGCAGAAGG GGCCGGGGAT GGCGGTGTTG
GCCGGTACGC TTAACCAGAC TGGCGCGCTG GAAGTGCGGG TAACCAAGCC GGCCAGTGAG
AGTACGTTGG CCCGGATTAT TACGATGGTG AGCGAAGCGC AGGCGCGTAA GGCGCGGTCG
CAGAGCTTTC TTGAATATTT TGAGCAGCGG TATGCAATTG GCGTAATCGT TGCGGTGATT
TTGTTCATCC TTGCCGTACC GGCGCTAACC GGAGCCGACT TTGCCGATAC CTTCTACCGC
GGAATGGTGC TGCTCACAGT CGCTTCGCCG TGCGCGCTCG TGATCAGTGT ACCGGCTTCG
TTACTAAGCG CGATTGCAGC CGGGGCGCGG CGTGGGGTGC TGTTCAAGGG TGGCGTGCAT
CTTGAGGAAT TGAGCAAGGT ACGGGTGATC GCTTTCGACA AAACCGGCAC GTTGACCTTT
GGTAAGCCGA CAATGACCGA TCTCGTGCCG ATGAATGGGG TGGACGAAGC CGATCTATTG
GCGATTGTGG CCCGCGCCGA GCAACCTTCA GAGCACCCGA TTGCGCGTGC CATTTTGCAA
GCCGCCGAAG AACGTGGGAT CACGGTTGCG CCACCCGAGC AGTTTACGGC TGTGACCGGG
ATGGGTGTGC GTGCGATGTG GGAAGGGGTT GAGACACTGG TCGGTTCGCC GCGCTTGTTT
GCCGAGGCCG GGGTGGTTAT GCCGTCGGAG TTGTCGGCGC GGGCCGATGA GCTAATGGCG
CAAGGGCGCG GGAGTGTGTT GTTCGTTCGG CGTGGCGAGC AGTGGTTGGG ATTGGTAGCG
GTGATGGATC GTGAACGGCC CGATGCAGCC CAGCGCATTG CCGAGTTGCG CGCTGCCGGT
ATCGAGCGGA TCGTGATGCT GACCGGCGAT AATCCGCAGG TGGCGGAAGC GATGGCGCGC
CGGCTGGGTG TGGATGAGGT GCATGCCGGC CTGTTGCCCG CCGATAAGCT GCGTATCGTC
GAGCAGTTAC GCCAGCGTTA CGGTGGTGTG GCGATGGTCG GCGACGGTGT GAATGACGCA
CCGGCGTTGG CGGCGGCGAC GGTGGGAATT GCGATGGGGG CTGCCGGTAC CGATGCGGCA
CTCGAGACGG CCGATCTGGT GTTGATGCGC GATGATTTGA GTGCGATTAC TTACGCACTG
CGGCTCAGCC GCCGCACCCA GCGCGTGGTC TGGCAAAATA TTATCTTTGC GCTGGCGGTT
GTGGTAGTGT TGGTGACAAC AACATTGACG GTGGGTGTAC CGTTGCCACT CGGTGTGGTC
GGGCACGAAG GCAGCACGAT TATTGTGGTG CTCAACGGGT TACGGCTATT GATGTTCCGC
TGA
|
|---|
| Protein sequence | MTTISNTAPR QRLTLLLNDE ILEPAFVALT LIGIVTGLIL EGSGAPESII LVVHLATYFF
GGFYAVRAII EALRHWSIEV DLLMVLAALG AGYLGDFTEG AILLFLFSLS NVLQAYAMRR
TEQAITALMQ LRPDTVTVHR DGRELDLPIE AVQVGDVIVL RPGDRVPLDG VIERGSGSFD
ESALTGESMP VQKGPGMAVL AGTLNQTGAL EVRVTKPASE STLARIITMV SEAQARKARS
QSFLEYFEQR YAIGVIVAVI LFILAVPALT GADFADTFYR GMVLLTVASP CALVISVPAS
LLSAIAAGAR RGVLFKGGVH LEELSKVRVI AFDKTGTLTF GKPTMTDLVP MNGVDEADLL
AIVARAEQPS EHPIARAILQ AAEERGITVA PPEQFTAVTG MGVRAMWEGV ETLVGSPRLF
AEAGVVMPSE LSARADELMA QGRGSVLFVR RGEQWLGLVA VMDRERPDAA QRIAELRAAG
IERIVMLTGD NPQVAEAMAR RLGVDEVHAG LLPADKLRIV EQLRQRYGGV AMVGDGVNDA
PALAAATVGI AMGAAGTDAA LETADLVLMR DDLSAITYAL RLSRRTQRVV WQNIIFALAV
VVVLVTTTLT VGVPLPLGVV GHEGSTIIVV LNGLRLLMFR
|
|---|
| |