Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cagg_0892 |
Symbol | |
ID | 7267964 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chloroflexus aggregans DSM 9485 |
Kingdom | Bacteria |
Replicon accession | NC_011831 |
Strand | - |
Start bp | 1120933 |
End bp | 1121727 |
Gene Length | 795 bp |
Protein Length | 264 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 643565740 |
Product | SCP-like extracellular |
Protein accession | YP_002462247 |
Protein GI | 219847814 |
COG category | [S] Function unknown |
COG ID | [COG2340] Uncharacterized protein with SCP/PR1 domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.0000243289 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCGTGCTC GATATGCGGT TGCCCTCCTG TTCCTTCTCT GCCTGTGGTG TGCAACCATA GCGGCGCCGC CAGCGCCGCT CGCAGCGCAG ACCGATGTTC GCCAGCAGGT GATCGAACTT ACCAACCAGA TTCGGATGGC TCACGCCCTG CCGCCGCTCA AGCGCAACGA CAACCTGCAA GCCGCCGCCG ACTGGATTAC ACAAGACAAT GCCGGCCAGA ATACGCTGTC GCACACTGAC AGCCTTGGGC GCACTATCGG CCAGCGGTTT CCCGCGTTTG GTTACAATAA CTATTCTCTG ATCGCCGAGA ATCTGGCAGC GGGATATGCA ACGCCGGAGG TAGTGGTTGA GGAATGGATG ACCAGCCCGG GCCACCGCGA CAACATTCTT CGCTCCGGTT TGTGTGAAAT CGGCGCCGGC TACACTTATC GGAGCGATTC CTATTATCAA CGCTATTGGT CGCAGACGTT TGGCTGTCGC TGGGCCACCT ACCCGGTGGT GATCAACGGT GAAGCGGCGA TCACGGAGTC GCCAAACGTT CAGCTCTACA TTTACGGTAG CGGTTGGGCG CAACAGATGC GACTCAGCAA CGACGGCATC AATTGGACGG AATGGAGGCC ATATCAATCC AGCTACCCTT GGACGCTACT CGATGGCAGC GGCGAGCGCA CGGTCTTGGT GGAGATACGC AACGGCGCGA CTGTTTATCG CAATAGCGAC ACTATTATCT TGCAGAGCGC CGCGCCGTTG ATAACCGGCC CGCACCGGTT GTTTGTGCCG TTAGTGGTGC GGTAG
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Protein sequence | MRARYAVALL FLLCLWCATI AAPPAPLAAQ TDVRQQVIEL TNQIRMAHAL PPLKRNDNLQ AAADWITQDN AGQNTLSHTD SLGRTIGQRF PAFGYNNYSL IAENLAAGYA TPEVVVEEWM TSPGHRDNIL RSGLCEIGAG YTYRSDSYYQ RYWSQTFGCR WATYPVVING EAAITESPNV QLYIYGSGWA QQMRLSNDGI NWTEWRPYQS SYPWTLLDGS GERTVLVEIR NGATVYRNSD TIILQSAAPL ITGPHRLFVP LVVR
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