| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cagg_0890 |
|---|
| Symbol | |
|---|
| ID | 7268343 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chloroflexus aggregans DSM 9485 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011831 |
|---|
| Strand | - |
|---|
| Start bp | 1117059 |
|---|
| End bp | 1118810 |
|---|
| Gene Length | 1752 bp |
|---|
| Protein Length | 583 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 643565738 |
|---|
| Product | binding-protein-dependent transport systems inner membrane component |
|---|
| Protein accession | YP_002462245 |
|---|
| Protein GI | 219847812 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG4986] ABC-type anion transport system, duplicated permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.807719 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 0.00198291 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGAGTTTAA CGAGAGAACA AGGGGTTGGT GTGATGTTTA AACCGCGTAC TTTTACTCCT
GCGCCGCCGG CGCAATCGAT CTTGACGCGG GCCGATGTTT GGTTGTTGCT AGTGCTGATC
GGGTTGCTGG CGTTGGTGAT TGGCGCTGCC GAAAGCGCGC CGGCGACGGT ACAAGGGCCA
GCGATTGACC TCTCATTGAG CGCGTTGCCC TTCTACGCTT TGCGTTCGGT GGGACGGATG
GCCTTGGCTT ATGCGCTGTC GTTTCTGTTT ACGATGATCT ACGGCTACAT TGCGGCGTAC
AATGCGCGTG CCGAGCGAGT GCTTATTCCG TTGCTCGATG TGTTGCAGAG CGTGCCGATT
TTGTCGTTTC TGCCGGTGGT CTTGCTCAGC CTGAGCACGG TGCTGCCGGA AGCGCTGGCA
GTGGAATTGA CCGCGGTGGT GCTCATCTTC ACCAGCCAAG TCTGGAATAT GACCTTTGCG
TGGTACCAGT CGCTGACCAC CATCCCGCGC GAGCTGCGCG AAGCGAGCAG CATCTTTCGC
TTCTCGCGCT GGCAACGCTT TACCACCCTC GAATTTCCGT TCGGTGCGCT AGCGTTAGTC
TGGAACAGCA TGATGAGCTG GGCCGGCGGC TGGTTTTTTC TCATGGCAGC CGAAATCTTC
ACGCTCGGTG AGCGCGATTT TCGCCTGCCG GGGCTAGGGG CGTTCTTGCA AACCGCTGCG
AACGCTGGCG ATCTGACCGC GATTGGCTGG GGCATTCTCA CGCTGGTGGC GGTGATTGTC
ATTCTTGACC AGTTTGTCTG GCGACCTTTG CTAGCGTGGG CCGGCCAGTT CCGGCTGGAA
ATGATCGAAC GCGATGATGA AGAGGCGCAG TCGTGGTTCT ACGATTTGAT CCGGCAGTCG
GTGGTGGCCG GCTGGATTGG TGGCTTGATG GGAGCCATCG ATCGCATGAT TATGCGCCGG
TTGAGCCGGG GACCGGCGCC TGATCCCTAC CTCAGCGGAT CAACCCGACG TTCTTGGTGG
GGATGGGTGC TGGTAGTGGT GAGTGTGGTT TTGGTTGGCT GGGGTGGATG GGTTGGCAGC
GGTCTGCTGC TGAGCGTGCC GCTGGTGCAA TGGGGCGCGA TTGCGCTGAG TGTGGGCGCA
ACGATGGCGC GAGTAGCGAC GGCGATGACT ATTGCTCTGC TGTGGACGGT GCCGGTCGGG
GTATTTATCG GCACGCGCCC GCGGGCGGCG GCCATTTTGC AGCCAATCGT GCAGATCGCG
GCGTCGGTGC CGGCGACCGC CCTCTTTCCG GTGTTGGTGT TGGCATTTCT GGCCCTGCCC
GGCGGTCTCA ATCTCGCGGC GGTGCTGTTG ATGATGCTCG GTACGCAGTG GTACATCTTG
TTTAATGTGA TTGCCGGTGC GGCGGCAATC CCTCAAGATT TGCGTTTCAC CAGCGAGTTG
TTGCAGTTAC GAGGATGGCA ACGCTGGCGT ACTTTGATCT TGCCCGGCCT CTTTCCCTAT
CTGGTCACCG GGTTGATCAC GGCTAGTGGC GGGGCGTGGA ATGCCAGCAT CGTTGCTGAA
TATGTGGTCT TCAATCAGCA GACCTACCAG ACGATCGGGA TTGGGGCGCA AATTGCAGTG
GCGACGGCAG ATGGCGATTT TGCTGGCCTG TTTGCTGCCA CTTTGGCTAT GATCGTCGCG
GTGGTCACGA TCAACCGGCT GGTCTGGCGG CGTTTGTACC GGCTGGCCGA GACAAAGTAT
CGCATGGAGT AA
|
|---|
| Protein sequence | MSLTREQGVG VMFKPRTFTP APPAQSILTR ADVWLLLVLI GLLALVIGAA ESAPATVQGP
AIDLSLSALP FYALRSVGRM ALAYALSFLF TMIYGYIAAY NARAERVLIP LLDVLQSVPI
LSFLPVVLLS LSTVLPEALA VELTAVVLIF TSQVWNMTFA WYQSLTTIPR ELREASSIFR
FSRWQRFTTL EFPFGALALV WNSMMSWAGG WFFLMAAEIF TLGERDFRLP GLGAFLQTAA
NAGDLTAIGW GILTLVAVIV ILDQFVWRPL LAWAGQFRLE MIERDDEEAQ SWFYDLIRQS
VVAGWIGGLM GAIDRMIMRR LSRGPAPDPY LSGSTRRSWW GWVLVVVSVV LVGWGGWVGS
GLLLSVPLVQ WGAIALSVGA TMARVATAMT IALLWTVPVG VFIGTRPRAA AILQPIVQIA
ASVPATALFP VLVLAFLALP GGLNLAAVLL MMLGTQWYIL FNVIAGAAAI PQDLRFTSEL
LQLRGWQRWR TLILPGLFPY LVTGLITASG GAWNASIVAE YVVFNQQTYQ TIGIGAQIAV
ATADGDFAGL FAATLAMIVA VVTINRLVWR RLYRLAETKY RME
|
|---|
| |