Gene Cagg_0874 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_0874 
Symbol 
ID7268325 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp1083978 
End bp1084877 
Gene Length900 bp 
Protein Length299 aa 
Translation table11 
GC content63% 
IMG OID643565720 
ProductAsparaginase 
Protein accessionYP_002462229 
Protein GI219847796 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1446] Asparaginase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.074479 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACAACAG AGTCGTTGAT CGCACTGATC GTGCATGGTG GAGCATGGGC AATCCCCGAT 
GACCAGGTGG CGGCGCATAT CGCCGGGTGC GAGGCGGCGC GAGCCGCCGG CTGGCAATGT
TTGCAGCGCG GTGGCAGCGC GCTCGATGCA GTCGAGGCGG CGGTGCGGGT GATGGAAGAT
GATCCGATCT TCGATGCCGG CACCGGTTCG GTGCTCAATA GCGCCGGTAT GGTCGAACTT
GACGCGGCGG TGATGGATGG GCGCACCCTT CGTTATGGTG CTGTGGCCGG GGTGCGCCAG
ATTCGCAACC CGATCACGTT GGCCCGCCAC GTGCTCACCG GCCCGGCGAC GATGCTGGTC
GGTCCCGGTG CGGAAGTGTT TGCCGTGTCT GTTGGAATGA CGCTGTGTAC CAATGAAGAG
CTGATTGTTG AGCGTGAGCG ACGTTTGTGG TTAGAGTGGC AGGCCAGGGG TGCGCCTCCT
CCCTCTGCGA CCGATGCGCA CGATACGGTG GGTGCGATTG CGCTCGATCG GGCTGGGAAT
CTGGTCGCCG CTAATTCGAC CGGTGGTACG CCCTTTAAGC TGCCGGGCCG GGTTGGTGAT
ACGCCGCTTA TTGGATGTGG ACTATACGCG ACGCCGGTAG GTGCAGCCGT TTGCACCGGC
TGGGGTGAAT CGATTACGCG GGTGGCGCTG GCCCGGCGAG TGGTTGAGTT GCTGGAAGCC
GGAATTGCTC CCCAAGAGGC TGCTGAGCGT GGTATTCGCT TGCTCGGTGA GTTGGTGCCT
GATGGACGCG GTGGCGTTAT CGTCTTGACA GCGGACGGTT CGGTGGGTTT GGCGTGGAAT
ACGCCGCGTA TGGCCCATGC GTATATCGAT GGGCGCGGTG TTGCTCACTC AGGGGTATAA
 
Protein sequence
MTTESLIALI VHGGAWAIPD DQVAAHIAGC EAARAAGWQC LQRGGSALDA VEAAVRVMED 
DPIFDAGTGS VLNSAGMVEL DAAVMDGRTL RYGAVAGVRQ IRNPITLARH VLTGPATMLV
GPGAEVFAVS VGMTLCTNEE LIVERERRLW LEWQARGAPP PSATDAHDTV GAIALDRAGN
LVAANSTGGT PFKLPGRVGD TPLIGCGLYA TPVGAAVCTG WGESITRVAL ARRVVELLEA
GIAPQEAAER GIRLLGELVP DGRGGVIVLT ADGSVGLAWN TPRMAHAYID GRGVAHSGV