Gene Cagg_0871 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_0871 
Symbol 
ID7268322 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp1080662 
End bp1081510 
Gene Length849 bp 
Protein Length282 aa 
Translation table11 
GC content57% 
IMG OID643565717 
Producthypothetical protein 
Protein accessionYP_002462226 
Protein GI219847793 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.0369411 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTGATG ATCGAACAGA GCTGCATTTT CCGGCTAACG GAATGACCGA AGTACCACTG 
CTTTGGCAAC CGCAAGTGGT ACGCTGCCAT GCTGCCGGTC CCGGCGGACG ACCGTTGCAT
GTCTTGATTG ATACCGGCAC CGATCCTTCG GCTATCGATC TGACGTTGGC CCGTCGCCTT
GACTTACGCA TCGGCGATTT TGCGCTCGGT TCTGATGCGG CATCCGATGC GGTTCCCTTT
ACCGAGACGA TGTTGCCTTG GTTGCGTATC GGCACATTGA CCCTGCGGCA TCTGTACCTG
ATGGCCGTTG ACCTTAGCCA CGCGCCATTC CCGGTAGATG TTGTGCTCGG ATACAATGTT
TTGTATCAAC TCAACCTGAC CATTGATTAC GGGCAACAAA CGCTGCGCTT ATGCCACTCC
GATCTTCCCC CGTCACCACC CGGACCGCGG GGAGTGTCCC TCCCTCTCCT TTTCTTCGAG
CACTTCCCGG CGATACGTGC TTACGTCACT GCCCCGCATA CCGCCGAGCT GCTCCTTACC
CTCGATACTG GATCAAACAG TGCCCTTACC CTCAGCCCAG ATCTCGCAGC GACACTTGGG
CTTGATGTGC AAACTACACC TGCTGCCACC GGTCATGGTT TCGCTACGAC CACGCCCGTG
GTGCTTGGTA TGGCCGTCGA TCTGCAGATT GGACCGTTTC ATCTTGATAG CGTTGCGGTT
GATGTCCCGG CTACTCACCA CGGTGACCTT GGCCGCCCGG GGCGTGCGAA TGCCGGTAAT
CGGTTACTTA GTCGCTTTCG GCGGGTTACC CTCGATTATC GGCGTGCGGT GTGTATTTTA
GATGAGTAG
 
Protein sequence
MLDDRTELHF PANGMTEVPL LWQPQVVRCH AAGPGGRPLH VLIDTGTDPS AIDLTLARRL 
DLRIGDFALG SDAASDAVPF TETMLPWLRI GTLTLRHLYL MAVDLSHAPF PVDVVLGYNV
LYQLNLTIDY GQQTLRLCHS DLPPSPPGPR GVSLPLLFFE HFPAIRAYVT APHTAELLLT
LDTGSNSALT LSPDLAATLG LDVQTTPAAT GHGFATTTPV VLGMAVDLQI GPFHLDSVAV
DVPATHHGDL GRPGRANAGN RLLSRFRRVT LDYRRAVCIL DE