| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cagg_0861 |
|---|
| Symbol | |
|---|
| ID | 7268312 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chloroflexus aggregans DSM 9485 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011831 |
|---|
| Strand | - |
|---|
| Start bp | 1071046 |
|---|
| End bp | 1072200 |
|---|
| Gene Length | 1155 bp |
|---|
| Protein Length | 384 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 643565707 |
|---|
| Product | PAS/PAC sensor signal transduction histidine kinase |
|---|
| Protein accession | YP_002462216 |
|---|
| Protein GI | 219847783 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
|---|
| TIGRFAM ID | [TIGR00229] PAS domain S-box |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.339041 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.260174 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATGAGT TGTTTGCCGC CTTTGCGCAC GCGCCACACG CTGTATTTTG GCTTAGTGCT
GAGGGGCGTA TCGTCGATTG CAATGCGGCT GCGGCAACAC GGTTTGGGTT GACGCCTGCC
GATCTGCGTG GGCGGTTGTT TGCAACCCTA CTCGATCCGT TTAGTATTGC TAAGGCGCAG
ACGATGATCG AGCAGACGCT GCGGGAAGGT GGCGTACAGC ATTGGGAGCT TGATCATCTG
CGGGTTGGGG AGCCGCCGTT TTTGCTCGGC TACACGACGT GGCTGTTACG CGATGAGGCT
GGCGCCGTTT GTGGTGTGAT CGCGTTGGGT CTCGATCTCG GTTTGGCAAT GACGCTTGCA
GCGCAACTCG CGGCAGCGAA TCAGCAATTA GAAGCAACGT TAAAGCAACT GGAACACGCC
CATGCCGAAC TCAAAGCGGC GCAGACCCAA CTGGTGCAGT CTGAGAAGAT GCGGTCGCTT
GGTCAATTGG TGGCCGGTGT CGCGCACGAG ATTAATACGC CGTTGGGGTA TGTGGCGAAT
AATCTGGCGT TTCTGGCCGA GCGGTTGCCG GCGTTGCGCG CTGCTCCTAC CGACGAGCTG
GGTTGGCGCG ATGTGACCGA TGCGATTCGC GAGAGTCAAA CCGGTATCGA ACGGATTGCC
GCCATTGTGC GTGCTTTGCG GGTGTTTGCT CGTCCCGATG AAGATAGTTT GGTGCCGGCT
GACGTAAATG AGGGTTTGGC AAGTACCGTG CGTATGGTGC GCGCGGTCAG CGGCCCACGT
GTTACAATTC ACGAGGAGTA TGCTCAGGTG CCCCGCGTGC TTTGCCATCC CGGTGAGTTG
AATCAGGTGT TTCTCAATCT TCTGCTGAAC GCAGTGCATG CGTGTCGCGG CACCGGCACC
GTGATCGCGC AAACGATGAG TGATGGAACC TCAATTACGG TAACGATTCG CGATACCGGG
ATCGGGATGG ATGCGGCGAC GCTGGCCCGG CTAGGAGAGC CGTTTTTTAC TACGTGGCCC
GATGGCGAAG GGACGGGTTT GGGATTGGCG ATCTCGCGCG AGATTGTTGC GCGCCACGGT
GGTCAGCTCC GGTTTCAGAG CGAACCGGGT CGTGGCACGA CAGTTGAGGT GATTTTGCCG
GTGGGAACGC TCTAA
|
|---|
| Protein sequence | MNELFAAFAH APHAVFWLSA EGRIVDCNAA AATRFGLTPA DLRGRLFATL LDPFSIAKAQ
TMIEQTLREG GVQHWELDHL RVGEPPFLLG YTTWLLRDEA GAVCGVIALG LDLGLAMTLA
AQLAAANQQL EATLKQLEHA HAELKAAQTQ LVQSEKMRSL GQLVAGVAHE INTPLGYVAN
NLAFLAERLP ALRAAPTDEL GWRDVTDAIR ESQTGIERIA AIVRALRVFA RPDEDSLVPA
DVNEGLASTV RMVRAVSGPR VTIHEEYAQV PRVLCHPGEL NQVFLNLLLN AVHACRGTGT
VIAQTMSDGT SITVTIRDTG IGMDAATLAR LGEPFFTTWP DGEGTGLGLA ISREIVARHG
GQLRFQSEPG RGTTVEVILP VGTL
|
|---|
| |