| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cagg_0857 |
|---|
| Symbol | |
|---|
| ID | 7268308 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chloroflexus aggregans DSM 9485 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011831 |
|---|
| Strand | + |
|---|
| Start bp | 1068308 |
|---|
| End bp | 1068874 |
|---|
| Gene Length | 567 bp |
|---|
| Protein Length | 188 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 643565703 |
|---|
| Product | peptide deformylase |
|---|
| Protein accession | YP_002462212 |
|---|
| Protein GI | 219847779 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0242] N-formylmethionyl-tRNA deformylase |
|---|
| TIGRFAM ID | [TIGR00079] peptide deformylase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.000415124 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.708888 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCATTC GACGCATTCT CCGCATTGAC GACGCCGAGG ATCGCAAAAT CCTCAAAATG
CAATGTCGTC CGGTCAAACT ACCGGATCGC AATCTCAAGC AGTTGGTCGC CGACATGTTC
GAGACCATGC ACGCCGCTAA CGGCGTGGGT TTAGCAGCAC CGCAAATCGG TATTCCAATC
CAGCTCTGCA TCATCGAAAT TCCGCCCGAA TACGAAGAAC AGCCCGACGG TAGCCTCATC
GAGGTGAATC CGGCTGAGCC GTATGTGCTG ATCAACCCAC GCATCGTCAA AACGAGCGGT
GAAGAGATTA TGCGCGATGA AGGTTGTCTC AGCCTACCCG GCTGGTACGG CATGGTCCCG
CGGCAAACGT GGGTGACGGT CGAGTTTCAA GACCTCAGCG GCAAACATCA CCGTCTCCGC
CGAGCCGATG GTCTTTTGGG CTGGGCGATA CAGCACGAGG TCGATCACTT GCACGGTATT
CTCTTCACCG AACGCATCCG CGACCTCAGC ACGCTGCGCG ACATTACCAA AGAGCGTGAA
GCGCAACCGG TCGAAGCCAA GGCCTGA
|
|---|
| Protein sequence | MAIRRILRID DAEDRKILKM QCRPVKLPDR NLKQLVADMF ETMHAANGVG LAAPQIGIPI
QLCIIEIPPE YEEQPDGSLI EVNPAEPYVL INPRIVKTSG EEIMRDEGCL SLPGWYGMVP
RQTWVTVEFQ DLSGKHHRLR RADGLLGWAI QHEVDHLHGI LFTERIRDLS TLRDITKERE
AQPVEAKA
|
|---|
| |