Gene Cagg_0832 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_0832 
Symbol 
ID7268284 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp1034870 
End bp1036525 
Gene Length1656 bp 
Protein Length551 aa 
Translation table11 
GC content57% 
IMG OID643565682 
ProductAMP-dependent synthetase and ligase 
Protein accessionYP_002462191 
Protein GI219847758 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGTCGTACC TGTTAACTCG TGAGCGGGGT TTGCATCGCC ATGCAAACAT CGAGTACAAT 
AACACGCATC AACCGAAAGT ACTGTTCATC ACGCCTATGG ATACGATATG GCATGCCCTT
GCTGCTCAAG CCGAGCAATA CCCTGATCGC ATCTTCCTGC GTTTTGCCGA CCGGCAATGG
CGCTACGCTG AAGCGGTAGC TCTCGCTCGA CGCGCTGCCG GCGTCTTTGC CGACCTTGGG
ATTGGCCTCG GTGATCGGGT TGGGTTGATG CTCGGTAATA CGCCTGATTA TCTGTGGGCA
TGGTTCGGCT GTGCTTGTCT TGGTGCGGTG ACGGTACCGA TCAACGTACA CCTTAAAGGG
GATGTACTCC ACTACATCCT CGAGCATGCC GGAGTGAAGG TGTTGGTGAT CGAACCGTCA
TTACTCGATC GCGTACTCGC CCTACGTGAC CGTTTGCCGG ACCTGCACCA CATTGTCGTG
CGGAGTGAGG CTGGGCCAAA CGGAACGCTT GCGTGGCCTG ATGCATTGGC CGGTGCAAGG
ATGGCCGAAC CTACCCCGGG AAACGCGACC GATCTCCATA GTATCTTGTA TACCTCCGGC
ACCACCGGTC CGCCAAAAGG CGTTATGCTC AACCATCAGG CCTATCTCCA CTCGGCGGCC
CTCTTCGCCG ATGTGATGAT CGGCGCCACC GCCGATGATG TGTTCGGAAC CAGCCTACCA
CTTTTTCATA TCAATGCTCA GGCGCATACC GTCTTACCGG CGATCTATCG TGGGACGAGC
GTTGCCCTGC TTGAGCAGTT TAGCGCTTCG CGTTATTGGC GGCAACTGGC CGATCTAGAG
GCGACGATCT GCAATCTCTT GGCCGCGATG ATCCCGATCT TGATGAAACA ACCACCGTCA
CCCGACGACC GCGCTCATCG GGTGCGGATA GCGGCCTGTG CGGCTACACC ACCCGATCTG
TGGCGTGCCT TTGAGGAACG ATTTGGGTTG ACGATCATCG AGGGCTATGG CCTGACCGAA
ACGACCGGTT TTTGCGTTGC GAATCCGCGT GATTCGGTGC GGGTGGGTAC GTTCGGAACG
GCAATGCCCG GTTTTGAGTT GGCGATTTTT GGCCCTGACG ATACTCCGTT ACCGCCCGGC
GTTCCCGGTG AGATAGTGAT TCGTCCACAG CGTGATAACC TGATTATGAT GGGGTATTAC
CGTCAGCCCG AACAGACGGC AACGGCTATG CGGGGTGGCT GGTTCCATAC CGGCGATCTT
GGGCGTCTGG ATGAAGCCGG CTATGCCATT TTCATCGACC GGCTCAAACA ATCGATTCGG
CGGCGGGGTG AGAATATCTC ATCGTGGGAA GTCGAACGGG CAGTGAATGC TCATCCGGCA
GTACTCGAAA GCGCTGCGGT CGGTGTACCG AGCGAACTAG GTGAGGAAGA GGTTAAGGTC
GTGGTGGTAT TACGCCCCGG TACTACCCTC GATCCGCTCG ACTTGGTGCG GTGGTGTGAA
GAACGACTGG CCTACTTCGC CGTACCGCGC TATATCGAGT TCCGCGACAG TCTCCCGAAG
ACGGCAACCG AGCGCGTTGA GAAGTATAAG CTGAAAGCCG AAGGTGTCGG CAAGGCGTGG
GATCGGGAAG CTGCCGGGTA TCGGGTGAAA CGGTAG
 
Protein sequence
MSYLLTRERG LHRHANIEYN NTHQPKVLFI TPMDTIWHAL AAQAEQYPDR IFLRFADRQW 
RYAEAVALAR RAAGVFADLG IGLGDRVGLM LGNTPDYLWA WFGCACLGAV TVPINVHLKG
DVLHYILEHA GVKVLVIEPS LLDRVLALRD RLPDLHHIVV RSEAGPNGTL AWPDALAGAR
MAEPTPGNAT DLHSILYTSG TTGPPKGVML NHQAYLHSAA LFADVMIGAT ADDVFGTSLP
LFHINAQAHT VLPAIYRGTS VALLEQFSAS RYWRQLADLE ATICNLLAAM IPILMKQPPS
PDDRAHRVRI AACAATPPDL WRAFEERFGL TIIEGYGLTE TTGFCVANPR DSVRVGTFGT
AMPGFELAIF GPDDTPLPPG VPGEIVIRPQ RDNLIMMGYY RQPEQTATAM RGGWFHTGDL
GRLDEAGYAI FIDRLKQSIR RRGENISSWE VERAVNAHPA VLESAAVGVP SELGEEEVKV
VVVLRPGTTL DPLDLVRWCE ERLAYFAVPR YIEFRDSLPK TATERVEKYK LKAEGVGKAW
DREAAGYRVK R