| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cagg_0808 |
|---|
| Symbol | |
|---|
| ID | 7268127 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chloroflexus aggregans DSM 9485 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011831 |
|---|
| Strand | + |
|---|
| Start bp | 1004237 |
|---|
| End bp | 1009477 |
|---|
| Gene Length | 5241 bp |
|---|
| Protein Length | 1746 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 643565658 |
|---|
| Product | laminin G, domain-containing 2 |
|---|
| Protein accession | YP_002462167 |
|---|
| Protein GI | 219847734 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3889] Predicted solute binding protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 0.412414 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTATTTTT ATAAAAATCG CCAAGATCTG CTGTGTGGTA ATTACAGAAT TTTCACGATA
GCCACTCCAT TATTCAAAAA TGCTTCAGCT TCACCCAATA CACTAAGTAA TAACTGTCAA
GCCATCGGGG GGGGTGGGGC TGTGAACCAT ACAAGAATTG TATTATTCTC TTCTCGCTTT
ACCGGTTCAA TACTTAGCTT GATAGTACTG CTTTGGGTAA TTGGCAGCCT GGTTCCATCG
ACACCGGTTT CGGCCACAAT TCCCAACCGA CAGCCATGGG TGCATCAACC GGGGACTTGC
CCACCTGCTT TGGAAGGTGC TGTCTTTGGA CTGGCCGGTG ATAGCTGTGG CGGTACCGGT
ACTGGCTTCG ACACTACCCA AATCTACGGC CACACCCTCA TCCGCGATGC TGCTTCTCCC
GCCACCCCCT GCGAAGGCGG TCGCACGACA GGCCTCTGCT ACCGTATGTG GTACTCCGGC
TTTGATGCCT TCGGCGTCCG CCGCATCGGT CTCGCCCTCT CCCCCGACGG CATCACCTGG
ACCCGCGTTA TTGGCCCTGG ACCCAGCGGC AGCGTGCTTG GTCCCGGCTC TGGCGGCGCG
TTTGATAGCG CGAACGTCTC CTTCCCGGCA GTCATCCGCA CCACCACCGG CTATCTGATG
TGGTACACCG GTGGCGACGG CACTACCTTC GCCATCGGCC TTGCCACCTC TACCGATGGC
ATCAACTGGA CTCGCATCCC CGGTCCGCTC GCCGGGAACG CCGTCCTCCG CCCCTCCGGT
ATCCCCGGCA CCTTCGATCA GACGATCATC GCTGCACCGC GCGTCATCCG TGATGCTGCC
TCCCCCCTGG CGCCCTGCGA AGCAGGCCGC ACCACCGGTC TTTGCTATCG TATGTGGTAT
CAAGGTATCG ACAGTAGCAG CCGCTTTTTC ATCGGCTATG CCGTCTCCCC CGACGGCCTC
AATTGGACCC GCATCTCCGG CCCCGGCACC AACGGCAGCG TGATCGGTCA AGGCCCTCCC
GGCACCTTCG ACTCCCAAAA CGCAGCTATC GACGCCGTCG TCAAAGATGG TCTCCGCTAC
CGGATGTGGT ACAGCGCCCA AGATGGCGCC GGCGCTCACC GTATTGGTCA CGTCGTCTCC
CTTGACGGAG TCAACTGGGT GCGCCCTGTT CCCAACGACC CCGTCTGGAG CGGGAGTGAC
GATCCTGGTA CCCTCAGCCC CGACAACGTC TGGAGTCCGT TCGTGCTGAA GGAGGGGCTT
AGCTATCGGC TGTGGTACAA CCATACCACC CGCGAGAACT CGCGCCGGGT GGGGCTGGCA
ACGATGATAC CGGGTACGCC GTTGAGCGCA GTCGGCCTAA GTGGCGTGGG CCCCCTCTAC
ACCATCACCT TCACCACCGC AGCGACTATT CCGGCAGATG GATATGTCTT GATCACGCTG
CCGGCGGCAG TGAACATCGC TGATGTCAGC GCGATTGCCC TGAGCGGGTT TGGCGCTGGT
GCGACTTTGA CCGTGGACGA TGGCATCCTG ACCGATGCCG AAGCGGGCGG CAATGCACGA
GGTGCGTTGT TGGTACGGCT GACCGAGGCC GTTCCGCCCG GTCCCAAGAG CATTTCGTTT
GCGATTGCTA CCCCACCTGC AACGGACACA ACCGTGTTGG TGCAGACCTT CGATAGCCGC
GAAGTGATTG AGTATGCCGG TGTGACGATT GGTGCCGGCG GTGTGGCGCC GACCCCTACC
AACACACCCA CCAACACACC CACCAACACA CCCACCAACA CACCCACCAA CACACCCATC
AACACACCCA CCAACACACC CACCAACACA CCCACCAACA CACCCACCAA TACACCCACG
GCCACCAATA CCCCGGGGCC ATCACCAACA CCAACCCCGC CACCTGATCC GGCGCCAAAC
ACGCAACCGT GGACTTTTGT GAATGGCCCA TGTGCTGATG GAGCGATCTT CGGCATCGCG
GGTAGTGGCT GCGGCGGCAG CGGCACCAGC TTCGATACCA ACGAGATCTT TCCGCCGAGC
ATTGTGCGTG ATGAAGCATC GCCTTTACGA CCGTGCGAGG GCGGTCGAAC GAGTGGCGTC
TGCTACCGAA TGTGGTATGT TGGCGTTGAT AATCCGATCG ATGCCAACCG CCGTATCGGC
TACGCCGTCT CACCCGACGG GATCACGTGG ACGCGCGTCC CCGGTCCACT TTCCGGTGGC
GCAGTCTTTG TCGGTTCTGG TATCCCCGGT ACCTTCGATA ACTTCGGCGT CTCGACGATG
TATGTCATCC GCTATGGTAG TGGCTTTCGG ATGTATTACA GCGGCCTTTC TGAACCCGGA
GTTATCAATA GCATTGGTTT AGCCGAATCG ACCGACGGGA TCAATTGGAC CCGCGTCCCT
GGTCCGTTCC CTAATGGCGG AATGATCGTC CCATCAGGGA TCAGTAGTCA GTTTGATACC
AATTACGTTG TAGCACCGGT AGTACTCATC GATGAAGCGT CACCCATCGC ACCCTGCGAA
AGCGGACGGA CGAGCGGGGT CTGCCACCGA ATGTGGTTTG AGGGCGTGCG CACCTCACCG
AGCTACACCT TCCGCATCGG CTACGCCGTC TCCCCCGACG GCATCAATTG GACCCGCGTA
GCCACGTACA GCGACGGATC TGTTGTCCAA CCCGGCCCCT TCGGCGATTT CGACGATAAC
AACGTCGGTG TGCCGATGGT CATCAAAGAT GGCGCTATCT ACCGGATGTG GTTCGAGGCG
AATGGCTATG CCACCGGCTA TACCACGGGC TATCTCGTCT CGACGGATGG TCGCACCTGG
AGCCGCGCCG TGCCAAACAC ACCCGTCTGG ACGGGCGCAA TGGATTCGAT CAACGAGGGG
TCGCCTGATG AAGTGTGGGC GGTGCGCGCG TTAAAGGAAG GCCCGACGTA CCGGCTCTAT
TACACAACCA GCACACGCCC CAATGCACGC CGCTTCGCGC TGGCCGAGAT GACTCCCGGC
GATCCATTAA GTGTGAGTGT GACACAGACT GGCACAACCT ACACCCTTAC GTTCACCACC
GTCGCAATCC CGGCAGGGGG CAGTGTGCTT ATTACGTTAC CGCCAGACAT CGCGGTAAGT
GCGTTGAGCG CTGATGGGAT GAGCGGATTT GGCAGCGGTG ATAGCTTCGA AGTTAACCCT
GCCGCAATTA CCGATGCACT CTCAGGTGGC GTGGCCCGCG GCGCGTTGCT GCTGCGTTTG
CCTGCCGGCG CGCTGGCGGG GGTGAAGAGC ATTACCTTCA CCATTACCGG CCTCAGCGCC
GATACCGGTG CGCTGGTACA AGTCTTTAAT GCGCGTGAGG TGATCGGGTA CGCTGAGGTA
ACATTACCGC TGGTAGCACC AACGGCTACC CCGACCAACA CGCCGACCAA CACGCCGACC
AACACGCCGA CCAACACGCC AACGAACACG CCCACCAACA CGCCGACGCC GACCGAGACG
CCGACGCCCA CCAACACGCC CACCAACACG CCGACGCCGA CCGAGACGCC GACGCCCACC
AACACGCCCA CCAACACGCC GACGCCGACC GAGACGCCGA CGAACACGCC AACGAACACG
CCCACCAACA CGCCGACGCC GACCGAGACG CCGACGCCCA CCAACACGCC GACGAACACG
CCAACGAACA CGCCCACTTA CACGCCGACG CCGACCGAGA CGCCGACACC TACCAATACG
CCGACGCCGA CCGAGACGCC CACCAACACG CCCACCAACA CGCCGACCGA GACGCCGACG
CCCACCAACA CGCCAACGAA CACGCCCACT TACACGCCGA CGCCGACCGA GACGCCGACG
CCCACCAACA CGCCGACGAA CACGCCAACG AACACGCCCA CTTACACGCC GACGCCGACC
GAGACGCCGA CGCCCACCAA CACGCCGACG AACACGCCAA CGAACACGCC CACTTACACG
CCGACGCCGA CCGAGACGCC GACGCCCACC AACACGCCGA CGAACACGCC AACGAACACG
CCCACTTACA CGCCGACGCC GACCGAGACA CCGGCACCTA CCAATACGCC GACGCCGACC
GAGACGCCCA CCAACACGCC CACCAACACG CCGACCGAGA CGCCGACACC TACCAACACG
CCCACCAACA CGCCGACCGA GACGCCGACG CCCACCAACA CGCCGACGCC GACCGAGACG
CCGACACCTA CCAACACGCC CACCAACACG CCGACGCCGA CCGAGACGCC GACGCCCACC
AACACGCCGA CGAACACGCC AACGAACACG CCCACTTACA CGCCGACGCC GACCGAGACG
CCGACGCCCA CCAACACGCC GACGAACACG CCAACGAACA CGCCCACTTA CACGCCGACG
CCGACCGAGA CGCCGACACC CACCAACACG CCGACGAACA CGCCAACGAA CACGCCCACT
TACACGCCGA CGCCGACCGA GACGCCGACA CCCACCAACA CGCCGACGAA CACGCCCACT
TACACGCCGA CGAACACGCC AACGAACACG CCCACTTACA CGCCGACGCC GACCGAGACG
CCGACAAACA CGCCGACGAA CACGCCCACT TACACGCCGA CGAACACGCC CACCAACACG
CCGACGCCGA CCGAGACGCC GACGCCCACC AACACGCCGA CGAACACGCC AACGAACACG
CCCACTTACA CGCCGACGCC GACCGAGACG CCGACACCCA CCAACACGCC GACGAACACG
CCAACGAACA CGCCCACTTA CACGCCGACG CCGACCGAGA CGCCGACACC CACCAACACG
CCGACGAACA CGCCCACTTA CACGCCGACG AACACGCCAA CGAACACGCC CACTTACACG
CCGACGCCGA CCGAGACGCC GACACCCACC AACACGCCGA CGAACACGCC CACTTACACG
CCGACGAACA CGCCCACCAA CACACCGACG CCGACCGAGA CGCCGGCACC TACCAATACG
CCGACGCCGA CCGAGACGCC GGCACCTACC AATACGCCGA CGCCGACCGA GACGCCCACC
AACACGCCGA CGTACACACC CACGGCGACC AACACGCCAA TAACTACCCC GACAGCGACG
GCCGTTCTAT CGCCAACGAC CTATCGCTAC TACATCCCGC TGATATTCAA CAGCTACAGT
CGTTACCTTG TCATTGATGA GAGGCTCATA CCTACTCCAA CGCCGGCAAG CTTTCGTCCC
GCACAATTCT TGCCCCTATA A
|
|---|
| Protein sequence | MYFYKNRQDL LCGNYRIFTI ATPLFKNASA SPNTLSNNCQ AIGGGGAVNH TRIVLFSSRF
TGSILSLIVL LWVIGSLVPS TPVSATIPNR QPWVHQPGTC PPALEGAVFG LAGDSCGGTG
TGFDTTQIYG HTLIRDAASP ATPCEGGRTT GLCYRMWYSG FDAFGVRRIG LALSPDGITW
TRVIGPGPSG SVLGPGSGGA FDSANVSFPA VIRTTTGYLM WYTGGDGTTF AIGLATSTDG
INWTRIPGPL AGNAVLRPSG IPGTFDQTII AAPRVIRDAA SPLAPCEAGR TTGLCYRMWY
QGIDSSSRFF IGYAVSPDGL NWTRISGPGT NGSVIGQGPP GTFDSQNAAI DAVVKDGLRY
RMWYSAQDGA GAHRIGHVVS LDGVNWVRPV PNDPVWSGSD DPGTLSPDNV WSPFVLKEGL
SYRLWYNHTT RENSRRVGLA TMIPGTPLSA VGLSGVGPLY TITFTTAATI PADGYVLITL
PAAVNIADVS AIALSGFGAG ATLTVDDGIL TDAEAGGNAR GALLVRLTEA VPPGPKSISF
AIATPPATDT TVLVQTFDSR EVIEYAGVTI GAGGVAPTPT NTPTNTPTNT PTNTPTNTPI
NTPTNTPTNT PTNTPTNTPT ATNTPGPSPT PTPPPDPAPN TQPWTFVNGP CADGAIFGIA
GSGCGGSGTS FDTNEIFPPS IVRDEASPLR PCEGGRTSGV CYRMWYVGVD NPIDANRRIG
YAVSPDGITW TRVPGPLSGG AVFVGSGIPG TFDNFGVSTM YVIRYGSGFR MYYSGLSEPG
VINSIGLAES TDGINWTRVP GPFPNGGMIV PSGISSQFDT NYVVAPVVLI DEASPIAPCE
SGRTSGVCHR MWFEGVRTSP SYTFRIGYAV SPDGINWTRV ATYSDGSVVQ PGPFGDFDDN
NVGVPMVIKD GAIYRMWFEA NGYATGYTTG YLVSTDGRTW SRAVPNTPVW TGAMDSINEG
SPDEVWAVRA LKEGPTYRLY YTTSTRPNAR RFALAEMTPG DPLSVSVTQT GTTYTLTFTT
VAIPAGGSVL ITLPPDIAVS ALSADGMSGF GSGDSFEVNP AAITDALSGG VARGALLLRL
PAGALAGVKS ITFTITGLSA DTGALVQVFN AREVIGYAEV TLPLVAPTAT PTNTPTNTPT
NTPTNTPTNT PTNTPTPTET PTPTNTPTNT PTPTETPTPT NTPTNTPTPT ETPTNTPTNT
PTNTPTPTET PTPTNTPTNT PTNTPTYTPT PTETPTPTNT PTPTETPTNT PTNTPTETPT
PTNTPTNTPT YTPTPTETPT PTNTPTNTPT NTPTYTPTPT ETPTPTNTPT NTPTNTPTYT
PTPTETPTPT NTPTNTPTNT PTYTPTPTET PAPTNTPTPT ETPTNTPTNT PTETPTPTNT
PTNTPTETPT PTNTPTPTET PTPTNTPTNT PTPTETPTPT NTPTNTPTNT PTYTPTPTET
PTPTNTPTNT PTNTPTYTPT PTETPTPTNT PTNTPTNTPT YTPTPTETPT PTNTPTNTPT
YTPTNTPTNT PTYTPTPTET PTNTPTNTPT YTPTNTPTNT PTPTETPTPT NTPTNTPTNT
PTYTPTPTET PTPTNTPTNT PTNTPTYTPT PTETPTPTNT PTNTPTYTPT NTPTNTPTYT
PTPTETPTPT NTPTNTPTYT PTNTPTNTPT PTETPAPTNT PTPTETPAPT NTPTPTETPT
NTPTYTPTAT NTPITTPTAT AVLSPTTYRY YIPLIFNSYS RYLVIDERLI PTPTPASFRP
AQFLPL
|
|---|
| |