Gene Cagg_0806 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_0806 
Symbol 
ID7268125 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp1001644 
End bp1003377 
Gene Length1734 bp 
Protein Length577 aa 
Translation table11 
GC content54% 
IMG OID643565656 
ProductPyrrolo-quinoline quinone 
Protein accessionYP_002462165 
Protein GI219847732 
COG category[S] Function unknown 
COG ID[COG1520] FOG: WD40-like repeat 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAACATC TCGCCCTCCG AATGTTCATC CTCTGCGCTG CTGTGATCAT GACCTCTTGC 
ACGACGAGTG TCGCTACCTT TACGCCGCAA TCCTTACCTA CGATACCCAC AACAGCCGTG
GTGAGGGCAA CGACCACGAC GTATCTACCG ATCATTTTCG GCCCACCCCC ACCTTCACCG
GTTGGTTGGT ACCAGCTCGC CGGTAATCCC CAACGTACCG CCTACACACC GGTAATTGTG
CAAGGACCTT ATCAATTTCG CTGGATTTGG AATGGGCCGG CGGGCGGTGG TGATGGTGGC
CCGGCGAGTG ACCATCTGCC ATTACCTAAA GCCGTGCAGC CGGTGATCGG CAATGGGATG
GTGTTCATCG GTCACAGTGA TGGTGTTGTA CATGCGTTGC ATACCGATAA CGGCACATTG
GCATGGAGCC GTTTGGTAGG AGGGCAAGTT CTCGGTACCG TCGCTTACCA TCCCGATTTA
CGGCGTGTAT TCGTCGGCTC AACCAATGGT CGTCTCTACA GTCTCAATGC GAATGATGGA
ACGATCATCG GCTCATACGA TGTGGGTGGC CCAATCGAGA TGTCGCCGCT GCTTGCCAAC
AATGTCATCT ACGTTGGCTC GATCATCAAT AAGGGAAAGA ACAATGGTGA AGGGACGAGT
GGAAGGTTGG TGGCGCTCAA TGCCAACGAT TTGACGCTCC GCTGGCAATA CAACCCGGGT
GCCGGTCTCC TTGCCTCACC GGCATATACT GCGAGTAACG GTGGTATGGT GATTATCGCC
GTCGAGGATA AAACAGTGCG CGCTTTACGG GTCAGTGATG GTGGTTTGGT GTGGAGCCAG
ACCGTGAATG CCGGTCGCGA TCCGCAGCGA CAATGGACGG CTTTTCCCGA TACATACCCG
GCAGTATCGG AGGCGAATGG TGTGGTCATT ATTCGATCCT ATTTCATGTG GCAACGCACG
TGGGCACCGC CGGTTAGCCA AACCGATACC ATCGATGAAA TCCGCCAATT TCTCACCCAA
AACCCGACTC ATCAATCGTT TTTTGTACTC GACCTTGCAA CCGGCCAACC GCGCTACGTG
GCACCGGTTC TTGGTGGTGG AATCGGCAAC AATGACGATT ACTACTCAAC GCCACCACAG
GTGGTTATTC GACGGTTGAG CAATAGTGAG GAAGTGGCGT ATGTTACATG GCGTAATAGC
CAATCGTGCC TCTCACCGAG CAATTGTGAT AACCGGGAAG AGGGTACCGT GGGTGAGATG
GATCTAAACA CCGGCCATAT TCGCTTCGTC GAAATCTATA AAAATAGCTG GCAATGGCGC
ATACCGGTTG ACGAACTCGG CTCGATGACG ATGGCGGGCG ATGCCCTCTT CTATTCACAC
TGGATGGCAA TGGCTGCGGT AACGATCACC GACCGTTCGC CGAGTCGTGG TCAAACTTTC
ACCAATCCGA TTCTGACCAG TAAATTGGTT GCCATTTCAA ACACGATCCG TCCGGGAACT
TGTAACCAAC GTGACAGTAC GCGCCATTAC TGCCCCACCG CCCATGGGGT CAACAATGAC
AGCTATCAAC TTGGGCCAGG ATTTTATATC TACTACGCTA GTGAAAATAT CTACGACCGC
TTCTTCACAC CACCTGTATT CGGACCGGCA ATTGACGAGA ACGGGGTGGT CTATTGGAAA
AGTGTTGATG GCGCGATCAT TGCGTTGGCT CCGCAGAGTG CGCGCTTGCC ATAG
 
Protein sequence
MQHLALRMFI LCAAVIMTSC TTSVATFTPQ SLPTIPTTAV VRATTTTYLP IIFGPPPPSP 
VGWYQLAGNP QRTAYTPVIV QGPYQFRWIW NGPAGGGDGG PASDHLPLPK AVQPVIGNGM
VFIGHSDGVV HALHTDNGTL AWSRLVGGQV LGTVAYHPDL RRVFVGSTNG RLYSLNANDG
TIIGSYDVGG PIEMSPLLAN NVIYVGSIIN KGKNNGEGTS GRLVALNAND LTLRWQYNPG
AGLLASPAYT ASNGGMVIIA VEDKTVRALR VSDGGLVWSQ TVNAGRDPQR QWTAFPDTYP
AVSEANGVVI IRSYFMWQRT WAPPVSQTDT IDEIRQFLTQ NPTHQSFFVL DLATGQPRYV
APVLGGGIGN NDDYYSTPPQ VVIRRLSNSE EVAYVTWRNS QSCLSPSNCD NREEGTVGEM
DLNTGHIRFV EIYKNSWQWR IPVDELGSMT MAGDALFYSH WMAMAAVTIT DRSPSRGQTF
TNPILTSKLV AISNTIRPGT CNQRDSTRHY CPTAHGVNND SYQLGPGFYI YYASENIYDR
FFTPPVFGPA IDENGVVYWK SVDGAIIALA PQSARLP