Gene Cagg_0771 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_0771 
Symbol 
ID7268090 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp955433 
End bp956479 
Gene Length1047 bp 
Protein Length348 aa 
Translation table11 
GC content54% 
IMG OID643565622 
Producthypothetical protein 
Protein accessionYP_002462131 
Protein GI219847698 
COG category[S] Function unknown 
COG ID[COG0392] Predicted integral membrane protein 
TIGRFAM ID[TIGR00374] conserved hypothetical protein 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCGTGC ATCGCTGGAA ACTGATTACA AGCATTTTCA TTAGCCTGGC AGTTATCGTA 
CTGGCTATTG CCAATCGCGC GTGGATCGCC GAAGCGTTCA GTTTGCTGAA TGATGCCAAA
CCCGGTTGGC TATTCGCCGC TTTCGTTCTG ATTGCCTTGA GCTATCTCAT CAGCGCGCAA
GTCTTTAATA TCGTGCTCCA TTCCCTCGGT TATCGCATGA ACCTCTTGCG CCTGTGGGCA
ACTGCACTCA CCGCAATTAT CATCAGTCAA TCAGTACCCG CCGGTGGCGT TGGTAGTTAT
GCCTTCCTGA TGAGCAACTT CAACCGCCGT GGGATTCGGG CCGGCGAATC GGCGCTGATC
GCTTCACTGG AAACGTTGAG TTATGTTGTT GCCATGCTGC TCATCTTCTC GTTTAGCCTC
GGCTACTTCG CATGGCATGG CCTCAGAGCT GCCGGAGCGA GCTATCTGGC GGCACTGATC
GGATTGGCAG TCATCGGTAC GGCGATCTTT GTTCTCACTC GTAGTGAAGA CACGTTACGG
CGCTGGCTGA GTAGCGTACA GGATGGGTTA GGTCGTCTGT TTGGTCAACG CTGGAGTAGC
ACATGGATTG ACCGCATTGT CGCCGATCTA GTCCGTGGCC GTAACTTGCT CATCCACCGA
CGGCGTGATG TGATCTTGTT AGTTCTAGTC CAGCTCACCG CCCTCAGCGG CCATAGTTTG
GCGATGTTAC TTGTGCTGCA CGCATTGGGC ACGGATGTGA CATTTGCAGT AGTCTTGTCC
GCCTTCGGTG TAGCATTGGT AACGTCTACC TTCAATATCC TCCCCGGTGG CGGTGGGACG
GTTGAAGCGG CGTTGGTCGC CGTGTTAAGC CAGATGGGAG TAGGACCGGC GGCAGTACCG
GCAGCCATTA TTTTTCGGCT GTTTAATTAC TGGTTAGCGA CTCCGATTGC AGCAATCTGC
TATCACTGGC TCATGCACGA ACCGGTGACA CCGTTAGTTC AGGCAAAGTT GTCGCGCGGG
CGGCGTGAAG CCCCTTCACA CGATTAA
 
Protein sequence
MGVHRWKLIT SIFISLAVIV LAIANRAWIA EAFSLLNDAK PGWLFAAFVL IALSYLISAQ 
VFNIVLHSLG YRMNLLRLWA TALTAIIISQ SVPAGGVGSY AFLMSNFNRR GIRAGESALI
ASLETLSYVV AMLLIFSFSL GYFAWHGLRA AGASYLAALI GLAVIGTAIF VLTRSEDTLR
RWLSSVQDGL GRLFGQRWSS TWIDRIVADL VRGRNLLIHR RRDVILLVLV QLTALSGHSL
AMLLVLHALG TDVTFAVVLS AFGVALVTST FNILPGGGGT VEAALVAVLS QMGVGPAAVP
AAIIFRLFNY WLATPIAAIC YHWLMHEPVT PLVQAKLSRG RREAPSHD