Gene Cagg_0712 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_0712 
Symbol 
ID7266964 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp879243 
End bp880025 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content56% 
IMG OID643565563 
Productsugar fermentation stimulation protein 
Protein accessionYP_002462072 
Protein GI219847639 
COG category[R] General function prediction only 
COG ID[COG1489] DNA-binding protein, stimulates sugar fermentation 
TIGRFAM ID[TIGR00230] sugar fermentation stimulation protein 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATACAG GACATGGAAC CGGTCAGCAG ATTCACCCTA TCGTGCGGGT ACCGTTCTCG 
GCCGGCGTAC CGTTGATCGA AGCGACATTT GCTGCGCGGT CTGGCCAATT TTTGGTCGAA
GCGCAGATGG GCGGACGCAT GGTGCGGGCA CATGTAGCCG ACCGTGGCCG TCTGGTCGAT
CTCCTCGTAC CCGGCGCTCG TCTGTTGCTC GCCCCGCGCG AGGAGGTTGG TCGTAAGACG
GCGTTTCAAG TGGTGGCGGT CTATCAAGAC AGCGATTTGG TCTCGCTTGA TACCCAACTA
CCCAATCGTC TGGTCGCTGC TGCGCTGTCG TTAAGAGCAT TACCTCAGTT TGCACGTTAT
GGTACTGTTC AGCGTGAGGT ACAGCTCGGC CCGCACCGAA TCGATTTTCG CCTGAGCGAA
GGGTTGGATA CCTGCTTGCT TGAAGTCAAG TCGGTTACTC GTGTGATTGA CGGGGTTGCG
GTCTTTCCTG ATGCTCCGAC CGAACGTGGT AGCCAGCATC TCGAATTATT GACCAACGCA
GCGCGCAACG GTCAACGAGC AGCAGTAGTG TTTATCATCC AGCGCTCTCA AGGGGTTGCC
TTTGCTCCTG ATGAGACAAT TGATCGGGCA TTTAGCCGAG CGTTACGTAC TGCACGCGCA
CTTGGGGTTG AGATATATGC CTATCTTTGC CCGGTAACAC CAACGGGTAT TACGCTTGGG
CATGAGGTTC CGGTATTCAT GTCGCTCAGT GCAGTTCCCA GCGAATTACG CCGTCGCCTG
TAA
 
Protein sequence
MNTGHGTGQQ IHPIVRVPFS AGVPLIEATF AARSGQFLVE AQMGGRMVRA HVADRGRLVD 
LLVPGARLLL APREEVGRKT AFQVVAVYQD SDLVSLDTQL PNRLVAAALS LRALPQFARY
GTVQREVQLG PHRIDFRLSE GLDTCLLEVK SVTRVIDGVA VFPDAPTERG SQHLELLTNA
ARNGQRAAVV FIIQRSQGVA FAPDETIDRA FSRALRTARA LGVEIYAYLC PVTPTGITLG
HEVPVFMSLS AVPSELRRRL