Gene Cagg_0710 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_0710 
Symbol 
ID7266962 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp877244 
End bp878458 
Gene Length1215 bp 
Protein Length404 aa 
Translation table11 
GC content56% 
IMG OID643565561 
Productmajor facilitator superfamily MFS_1 
Protein accessionYP_002462070 
Protein GI219847637 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAACAC GTTGGCAAAC AACCTTATGG ATCATGTTCG TTGCGCAATT TCTTTCGGCA 
ATCGGATTTT CAATTATTTT CCCTTTTTTA CCCCTCTACG TCGCCTATCT CGGTGTCGCT
ACGGTCGGTG ATATTGCCTT GTGGTCTGGG TTAGTCTTCT CATTGCAAGC TCTCACCATG
GCCATTGCTG CACCGATTTG GGGATCGTTG GCCGACCGGT TCGGCTACAA GTTGATGGTC
GAACGGGCAA TGTACGGTGG TGCGATAATT CTGTTGCTGA TGGGATTTGC GCGGTCGGCT
GAGGAGTTAA CGCTCCTACG GGCAATTCAG GGAATGATTA CCGGCACAAT TTCGGCGGCG
AATGCACTGG TCGCAACTGT TACCCCGCGC GAACGAATGG GGTTTGCAAT GGGAACGTTG
CAAATGGGAC TATGGAGCGG CACAGCTACC GGGCCACTCA TCGGCGGACT GATGGCCGAG
ACGCTGGGAT TTCGGGCCAC ATTTATCACA ACTGCGGCGC TCTTACTTGT ATCAGGTATA
CTGGTAACGA TAGGAGTGCG TGGTGGTCGG CCAGCACCGG TAAAGCCCAA ACAACAACCA
AGCGGAATGC TACGCGGTTG GTTGACGATT CTGCGCACTC CCGGCATCGG GCCGACTTAC
GGGATGCGCT TTCTGAGCAG CTTGGCGCAG ACGATCTTGT TACCGTTTGC GCCACTCTTC
ATCGCCAGCC TGCTCAGTGC CGGCGATCCG GTCAACGCCT TCACCGGTCT CATCGTTGGC
GTTTCGTCGG CAGCGGGCAC GGCCACTGCT ATCTGGCTTG GTCGCCTCGG TGACCGGATC
GGACACCGGC AGGTGTTAAT GGGGAGCGCA CTCCTTGCCG GTCTGACCTT TGCACCACAG
GGTTTGGCGA GCAATGTCTG GCAACTGCTC ATCTTACAGG CGCTCAGCGG AGCAGCAATC
GGCGGGATTA CCCCTTCGTT AAGTGCATTG CTTGGCCGAT ACACGGCAAC CGGCAATGAA
GGAGCCGTGT ATGGCCTTGA CAGCTCGATT GTATCGGCAG CACGAGCAGT TGCACCGTTG
TTCGGCGCGT TGGTGGTGGG ACCGTTCGGC TACGGAGCAG CGTTTGCGGT GAGTAGTGTA
GCATGTTTTG CTATCGGTAT CGGCGCAGCA CGGTTGCCTA CCGAAGAACG GCAGATTGTA
TCAAAACCGA CATAG
 
Protein sequence
MQTRWQTTLW IMFVAQFLSA IGFSIIFPFL PLYVAYLGVA TVGDIALWSG LVFSLQALTM 
AIAAPIWGSL ADRFGYKLMV ERAMYGGAII LLLMGFARSA EELTLLRAIQ GMITGTISAA
NALVATVTPR ERMGFAMGTL QMGLWSGTAT GPLIGGLMAE TLGFRATFIT TAALLLVSGI
LVTIGVRGGR PAPVKPKQQP SGMLRGWLTI LRTPGIGPTY GMRFLSSLAQ TILLPFAPLF
IASLLSAGDP VNAFTGLIVG VSSAAGTATA IWLGRLGDRI GHRQVLMGSA LLAGLTFAPQ
GLASNVWQLL ILQALSGAAI GGITPSLSAL LGRYTATGNE GAVYGLDSSI VSAARAVAPL
FGALVVGPFG YGAAFAVSSV ACFAIGIGAA RLPTEERQIV SKPT