Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cagg_0672 |
Symbol | |
ID | 7266923 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chloroflexus aggregans DSM 9485 |
Kingdom | Bacteria |
Replicon accession | NC_011831 |
Strand | - |
Start bp | 831249 |
End bp | 833756 |
Gene Length | 2508 bp |
Protein Length | 835 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 643565533 |
Product | primosomal protein N' |
Protein accession | YP_002462043 |
Protein GI | 219847610 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1198] Primosomal protein N' (replication factor Y) - superfamily II helicase |
TIGRFAM ID | [TIGR00595] primosomal protein N' |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.00593856 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | GTGGCCGAGG TAGCGGTGCG TACACCATCA GTTAGCCGCC GTCACGGTCA GATCTTTTCA TACCGTGTCC CCCCCCATTT GCATGAGCGT ATCTCTGTTG GGCACGTGGT GTGGGTGCCA TTGCGTCAGC AGCAGGTGCA GGGAGTCGTC GTTGCGTTGC AGGCACGTGT TGCTACGGCA TTGCGCGATG TGATCGATCT TGTCGACCCT GAGTTGGTCA TCCCGCCGTT GTGTATAGCG TTAGCGCGTT GGGTTGCGGA CACGTACTAT GCCCCATTTA TGGCAGTGCT CGATCTGTGC TTACCACCGG GCATTCCTCA GCAGGTAACA ACGACATGGC GCGCAACGCC GGCCGGATTG AAATATGAGC TAGGTGATCT ACCCGATCGG GAACGGGCGA TTCTGTTTTA TCTTCGCCGA CACGGTGAAC AAAGTGAGAC CGATTTACGA ACGGTGCTAC GTGGTAGCGA CGCACATTTA CGCGCTGCGT ATCGCTCATT GGCCGAACGC GGTTTGGTTG TGCGTGGCAC TCGTATCGAG CCGCCACGGG TGCGGCCACG GCGTGAACAA GTTGTGCAAC TTGCGGTTAC CGATCTCGAT CGGGCATTGG CAGATTTGCG ACGGGCACCC CGGCAAGCGA CGGTAGTTCG CTGGTTGGCC GATCATGCTG CCGGTGCGCC CCTGACGCTC ACCGAATTGC GTCGGGCTAC CGGTATCGAT ACTGCGGGTA TTCGTGCGCT TGAGCGGCGT GGGCTGATTA CAATCAGTGA GCGCGAGGTG TACCGTAATC CCCTCCTCAC GTTGGTATCA CCACCTGATA TACCACCACC ACTTACTGCT GCCCAGCGTG CCGCTTACGA ACTCATCGTA GCCGATCTTG AAGCCGGGGC TGGCGGACGG TTTTTATTGC ACGGGATTAC CGGTAGTGGC AAGACAGAAG TCTATTTACG GTTGGTCGCA CGTGCCCTTC GTTTGGGTCG ACAGGCGTTG GTGTTGGTGC CTGAAATCGC GTTGACTACG CAGTTGGTAC GCCGATTTGC CGCTCGTTTT GGCAATCAGT TGGCAGTCTT GCATAGCGGT TTGAGTGATG GTGAACGGTA CGATGCGTGG CGACGCCTGC GGCGAGGTGA GGCCCGTATC GTTATCGGTG CCCGTTCGGC ATTGTTTGCT CCCTTGCCTG AACTGGGGTT GGTAATTGTC GATGAAGAGC ATGAACCGGG GTTTAAGAAC GACACGGTTC CGCGCTATCA CGCACGCGAT GCCGCGTTGC AACTCGCCGA ATTAGGTGGG GTAACGGTTG TGCTGGGTAG TGCGACGCCA AGTGTCGAGA GTTTCTATGC AGCGCGGAAG GGGGTTCTGC GTCTCGTGAC ATTACCGGAA CGGATCGGTG GTCTGTTTGG GGCTGATGGC CTCGTGCATA CACGACCCCT GCCTTTACCA CCGGTGCGGC TGGTTGATAT GCGACGTGAA TTGCAGCAGG GTAATACTTC GATCTTTTCT ACCGTCCTTC AGCACGCACT CGCGCAGACG CTAGAACGGG GACAGCAAGC CCTGCTCTTT CTCAATCGGC GGGGTGCAGC TTCGTTCATC TTTTGTCGTG ATTGTGGCTA TGTCGCCCGT TGTCAGCATT GTTCAACACC ACTGACGGCA CACTACGATG ACGCCGTCGT GAACGAAACC GATGAGCCGT ACCGCATTCT GATCTGTCAT TCGTGTGGTC AACACACCGC GATGCCGGTT GTCTGTCCGC AGTGTCTGAG TCGTCGTATC CGCGCGTTAG GGACAGGTAC GCAGCGTGTG GTTGAGACAG TTCGTGAACT GTTTCCACAG GCGCGGGTGG CGCGCTGGGA TCGAGACAGT GCTTCCGGTA AAGATGCCCA CAATGCTTTA TTGGAAGCGA TGTTGGGGCG CCATATCGAT GTGTTGGTAG GCACCCAAAT GATTGCTAAA GGTCTTGATC TGCCGTTCGT TTCGTTGGTC GGGGTGATCC TGGCCGATAC CGGCTTGTAC GTCCCCGATT TTCGGAGCGG TGAACGTACC TTCCAACTCT TAACGCAGGT TGCCGGCCGA GCAGGACGGC GTAGTGAAGG GGCGCAGGTG ATCATTCAAA CCTATCAGCC CGATCATTAT GCACTGCAAG CAGCCCGTGA ACACGACTAC CAGGCGTTCT TTCGTGAAGA AATCGCATTT CGTCGCGCAC TCGCTTATCC GCCGTTTGGG CGGTTGGTGC GGTTTGTCGT CCATGCGGCT AGCGAATCAA CCTGCCGACA GCGAGCTGAG CAGCTTGCCA AAATGTTACA TAATTACATT CGCGATTATG ATCTCAGTGG TTGGCGTCTC ATCGGTCCAG CCCCGGCCTT CTTTCGCCGC CAACGCGACC GTTGGCGTTG GCACGTATTG TTGCGTCTGC CTGCCGATAG CGCCACTCAA GCTATTCACG CCGCCCTCGA TGCGCTCGGC CCGCTGCCCG GCTGGATCAT CGACGTTGAT CCGGTGCAAG TGTTATGA
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Protein sequence | MAEVAVRTPS VSRRHGQIFS YRVPPHLHER ISVGHVVWVP LRQQQVQGVV VALQARVATA LRDVIDLVDP ELVIPPLCIA LARWVADTYY APFMAVLDLC LPPGIPQQVT TTWRATPAGL KYELGDLPDR ERAILFYLRR HGEQSETDLR TVLRGSDAHL RAAYRSLAER GLVVRGTRIE PPRVRPRREQ VVQLAVTDLD RALADLRRAP RQATVVRWLA DHAAGAPLTL TELRRATGID TAGIRALERR GLITISEREV YRNPLLTLVS PPDIPPPLTA AQRAAYELIV ADLEAGAGGR FLLHGITGSG KTEVYLRLVA RALRLGRQAL VLVPEIALTT QLVRRFAARF GNQLAVLHSG LSDGERYDAW RRLRRGEARI VIGARSALFA PLPELGLVIV DEEHEPGFKN DTVPRYHARD AALQLAELGG VTVVLGSATP SVESFYAARK GVLRLVTLPE RIGGLFGADG LVHTRPLPLP PVRLVDMRRE LQQGNTSIFS TVLQHALAQT LERGQQALLF LNRRGAASFI FCRDCGYVAR CQHCSTPLTA HYDDAVVNET DEPYRILICH SCGQHTAMPV VCPQCLSRRI RALGTGTQRV VETVRELFPQ ARVARWDRDS ASGKDAHNAL LEAMLGRHID VLVGTQMIAK GLDLPFVSLV GVILADTGLY VPDFRSGERT FQLLTQVAGR AGRRSEGAQV IIQTYQPDHY ALQAAREHDY QAFFREEIAF RRALAYPPFG RLVRFVVHAA SESTCRQRAE QLAKMLHNYI RDYDLSGWRL IGPAPAFFRR QRDRWRWHVL LRLPADSATQ AIHAALDALG PLPGWIIDVD PVQVL
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