Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cagg_0652 |
Symbol | |
ID | 7266903 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chloroflexus aggregans DSM 9485 |
Kingdom | Bacteria |
Replicon accession | NC_011831 |
Strand | + |
Start bp | 807044 |
End bp | 807604 |
Gene Length | 561 bp |
Protein Length | 186 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 643565514 |
Product | SNARE associated Golgi protein |
Protein accession | YP_002462024 |
Protein GI | 219847591 |
COG category | [S] Function unknown |
COG ID | [COG1238] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.297918 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.0118286 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTGTCG AAACACAACT GCCGCTTTGG CGGGTATGGG TATGGCCCGC TGTCATCGGT ATTACGATTG CGGTTGCAAA CGTACTCGTC TTTATCTTAT TACCTCCCGA TTTGGTCGAA CGGTTAGGCG CCCTTGGTTA CTTGGGCGCC TTTCTTTCGG CTGGGATTGC CAACGCTTCC ATTGTGGTGC CGGTACCGTA TTATCCACTC TTGATCCGGC TCGGACAAGC CCTTAACCCG TATGGTGTCG CCGTCGCCGC CGCTGCCGGT TCGGTGCTCG GTGAGCTGGT CGCCTTTTAC GCCGGACGGA GCGGGCGCAA GGCTATGGAG CGCACCGCGT TCTACGAGTG GGTACATCGC CAGATGCAGC ATCGCTGGCG CGCACCGGTG GTGTTGTTCG TCCTCTCGGC TCCGCCTAAT CCGTTCTTCG ACGTTGCCGG GATTATCGCC GGCGCTGTCG GTGTGCCGGT CTGGGTGTTT GTTGCCACGG TGTTTGCCGC GCGTATTGTA CGGATGGGGC TGGTAGTCAT CCTTGGCTAC ACTATCTTTG GGGGTTGGTA G
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Protein sequence | MSVETQLPLW RVWVWPAVIG ITIAVANVLV FILLPPDLVE RLGALGYLGA FLSAGIANAS IVVPVPYYPL LIRLGQALNP YGVAVAAAAG SVLGELVAFY AGRSGRKAME RTAFYEWVHR QMQHRWRAPV VLFVLSAPPN PFFDVAGIIA GAVGVPVWVF VATVFAARIV RMGLVVILGY TIFGGW
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