Gene Cagg_0652 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_0652 
Symbol 
ID7266903 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp807044 
End bp807604 
Gene Length561 bp 
Protein Length186 aa 
Translation table11 
GC content59% 
IMG OID643565514 
ProductSNARE associated Golgi protein 
Protein accessionYP_002462024 
Protein GI219847591 
COG category[S] Function unknown 
COG ID[COG1238] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.297918 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0118286 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTGTCG AAACACAACT GCCGCTTTGG CGGGTATGGG TATGGCCCGC TGTCATCGGT 
ATTACGATTG CGGTTGCAAA CGTACTCGTC TTTATCTTAT TACCTCCCGA TTTGGTCGAA
CGGTTAGGCG CCCTTGGTTA CTTGGGCGCC TTTCTTTCGG CTGGGATTGC CAACGCTTCC
ATTGTGGTGC CGGTACCGTA TTATCCACTC TTGATCCGGC TCGGACAAGC CCTTAACCCG
TATGGTGTCG CCGTCGCCGC CGCTGCCGGT TCGGTGCTCG GTGAGCTGGT CGCCTTTTAC
GCCGGACGGA GCGGGCGCAA GGCTATGGAG CGCACCGCGT TCTACGAGTG GGTACATCGC
CAGATGCAGC ATCGCTGGCG CGCACCGGTG GTGTTGTTCG TCCTCTCGGC TCCGCCTAAT
CCGTTCTTCG ACGTTGCCGG GATTATCGCC GGCGCTGTCG GTGTGCCGGT CTGGGTGTTT
GTTGCCACGG TGTTTGCCGC GCGTATTGTA CGGATGGGGC TGGTAGTCAT CCTTGGCTAC
ACTATCTTTG GGGGTTGGTA G
 
Protein sequence
MSVETQLPLW RVWVWPAVIG ITIAVANVLV FILLPPDLVE RLGALGYLGA FLSAGIANAS 
IVVPVPYYPL LIRLGQALNP YGVAVAAAAG SVLGELVAFY AGRSGRKAME RTAFYEWVHR
QMQHRWRAPV VLFVLSAPPN PFFDVAGIIA GAVGVPVWVF VATVFAARIV RMGLVVILGY
TIFGGW