| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cagg_0644 |
|---|
| Symbol | |
|---|
| ID | 7266116 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chloroflexus aggregans DSM 9485 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011831 |
|---|
| Strand | + |
|---|
| Start bp | 793294 |
|---|
| End bp | 794388 |
|---|
| Gene Length | 1095 bp |
|---|
| Protein Length | 364 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 643565505 |
|---|
| Product | alpha/beta hydrolase fold-containing protein |
|---|
| Protein accession | YP_002462017 |
|---|
| Protein GI | 219847584 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG2267] Lysophospholipase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.283453 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCGTCTGT TAACTACCCT TTTCCGCTTG ATCACGCTCT TAAATGCCCT TGCTACCTTG
AGCGGCTTGC GTGGTCTCAC TTGGAGTGAA CGTCTCGCTG TGCCATTAAC CATCTTAAGC
TGGCACCAAC CGGCTGCCGG TTGGCAAGCA CATCTGTTGC TCATTCTACC GGCACTAGTA
GGCCAGCTCA TCCTTGCCAC AGCCCGCCGC CGTGATCTCG ATCCACGTCG ACGCTTGCAC
CCCGGTCGGT ACCCAGATCG GGTGATTACC CGTCTTGACC TACCGGCTCG CCACGGTCCG
GTACCGGCAC TCCATATTGT GCCACGCGGC GGTGCCACCA CTGCAATATT GGTAACGCAC
GGCTCCGGCT GTGACAAAAC CTTTTACGCC TGGCGATTAG TAGATGCGTT AATCGAGCGT
GGGATGGCAG TGGTGTTGAT CGACCTCGAT GGGCATGGCG AAAGTCCACG GCCACAAGCC
TATCCGCAGA TGGTTGAGAG TGTCGCCGAT CCGCTACGAT GGTTACAACA GCGCTACGAG
CGGATTGGCG CAATCGGCAT GAGCCTTGGT GGCGCCGTTC TCGCCCGCGC CGTTGCCGAC
GGCACACCGG TCGATGCGTT GGCGCTATGG GAGGTCCCGC CACGGTTACG CCTAAATAGC
CGTGAATATC GGCAGGTGCA AATCCGCGAA GCCCTCGCGA TTATCCAACC ACGACTGCTC
CACCTCTTCA CAGACGGGGC AATCGACCAC GTGATACGGG CATGGCAGAC GAGTGGCATT
CGTGCAACCA TTGGTACGTG GGATTTATTC GATGCTCTTA ACCTACCGGA CAGCCTCCAC
ATCCTTGGCC GGCATCATAC ACCGCTGTTG TTAGTCTACG CCGGACGTGA TGCAGTCGTC
CCGCCGGCAG CCGCTGCCGA AGTTGCAGCC CTCACTGCCG ACTGGGCCGA ATACCATTAC
TTGCCGTTTG CCAGCCATAT CTCGCTGCCG ATCGACCTTG CCTGCATCAA CCTCACCACC
GACTGGCTAC AACAGCGGCT GAGCCGGCTC ACCAATGCCG CGAATTCACC GGACTATCGC
CTAACGCGGG GTTAG
|
|---|
| Protein sequence | MRLLTTLFRL ITLLNALATL SGLRGLTWSE RLAVPLTILS WHQPAAGWQA HLLLILPALV
GQLILATARR RDLDPRRRLH PGRYPDRVIT RLDLPARHGP VPALHIVPRG GATTAILVTH
GSGCDKTFYA WRLVDALIER GMAVVLIDLD GHGESPRPQA YPQMVESVAD PLRWLQQRYE
RIGAIGMSLG GAVLARAVAD GTPVDALALW EVPPRLRLNS REYRQVQIRE ALAIIQPRLL
HLFTDGAIDH VIRAWQTSGI RATIGTWDLF DALNLPDSLH ILGRHHTPLL LVYAGRDAVV
PPAAAAEVAA LTADWAEYHY LPFASHISLP IDLACINLTT DWLQQRLSRL TNAANSPDYR
LTRG
|
|---|
| |