| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cagg_0643 |
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| Symbol | trmE |
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| ID | 7266115 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chloroflexus aggregans DSM 9485 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011831 |
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| Strand | - |
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| Start bp | 791926 |
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| End bp | 793284 |
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| Gene Length | 1359 bp |
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| Protein Length | 452 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 643565504 |
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| Product | tRNA modification GTPase TrmE |
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| Protein accession | YP_002462016 |
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| Protein GI | 219847583 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0486] Predicted GTPase |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00450] tRNA modification GTPase TrmE |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.461676 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGTGACA CGATTGCAGC AATTGCAACT CCGCCGGGTG AGGGCGGCAT TGGCATTATA
CGGCTAAGTG GGCCGGATGC TCAATCGATT GCCGTAAAGA TCTTTCGACC GATACGGCCG
GGACGGTTGC GGAGTCATCG GGTGCGTTAT GGTCACGTGA TTGGACCGGA CGGTAACGTG
ATCGATGAGG CGTTACTGAC ATTTATGGCT GCTCCGCATA GCTTTACCCG CGAAGACGTG
ATTGAAATCT CGTGTCATGG AGGGGCGCTG CCGGTGCAGT TGACTCTTGA AGCGGCGTTG
GCTGCCGGAG CACGGTTGGC CAATCCCGGC GAATTTACCA TGCGCGCTTT TCTCAATGGG
CGGATCGATC TGAGTCAAGC CGAAGCGACC CTCGATGTTA TCCGGGCACA AACAAGTGCG
GGGTTGGCAG TAGCGCAGGC CCAACTTGGT GGCTGGTTGG CGCGCGAAGT ACGGGTAGCG
CGGGCGGCGT TGCTCGAACC GCTGGCCTAT ATCACCGCCC TGATCGACTT CCCCGAAGAG
GGGATTGAAC CGCAAGCCGT GGCAGCGCCT ATTGCCCAGG CCTTGGCGAC GGTCGAGCGA
CTATTAGCGA GTGCTGAGCA AGGAATCGTC TTGCGGAACG GAGCACGAGT GGCATTGGTC
GGACGGCCTA ATGTTGGCAA ATCAAGCTTA CTCAACGCGC TCTTACGAGT TGAGCGGGCA
ATCGTGACCC CTATTCCCGG TACAACGCGC GATACGTTAG AAGAGACCGC AAATCTGGCG
GGTGTACCGG TGGTATTGAT CGATACGGCT GGTATGCGGA ACAGTACTGA TCCGGTGGAG
CAGATCGGGG TCGAGCGGGC AGCCGCTGCC TTGGCAAGTG CCGATCTGGC CCTCTTGGTT
TTCGATGCTC AGCAACCGTT GACCGACGAA GATGAGGCAA TGCTCACGAC CACGGCTGAT
AAACCTACGA TCATCGTCTG GAACAAATGT GACGATCCGG CAATCCTACC GCCGACAGCG
CCTGAACATC CGCATCGAGT TGCGGTAGCC GCTTGTTCGG CGCGGTATGG GCATGGGATC
GACGAGTTGG CGAAGACGAT AGCCACAACC CTTTTAGGTG GAACGTTACC GGCGGTGGGA
GCAACCCATC TGGTCAGTAA CCCACGTCAC CGGGCTGCAT TACGACGCGC TGCCGAATAT
TTGCGCGCTG CCCAAGAAAC ACTCAATACC AATGCAGCGA CCGACCTGCT GGCCGCCGAT
CTGACCGGCG CGACCAATGC GCTTGGTGAG ATCACGGGTG AGACGGTCGG CGAAGATTTG
CTCGATGTGA TCTTTAGCCG GTTCTGCATT GGTAAGTAG
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| Protein sequence | MSDTIAAIAT PPGEGGIGII RLSGPDAQSI AVKIFRPIRP GRLRSHRVRY GHVIGPDGNV
IDEALLTFMA APHSFTREDV IEISCHGGAL PVQLTLEAAL AAGARLANPG EFTMRAFLNG
RIDLSQAEAT LDVIRAQTSA GLAVAQAQLG GWLAREVRVA RAALLEPLAY ITALIDFPEE
GIEPQAVAAP IAQALATVER LLASAEQGIV LRNGARVALV GRPNVGKSSL LNALLRVERA
IVTPIPGTTR DTLEETANLA GVPVVLIDTA GMRNSTDPVE QIGVERAAAA LASADLALLV
FDAQQPLTDE DEAMLTTTAD KPTIIVWNKC DDPAILPPTA PEHPHRVAVA ACSARYGHGI
DELAKTIATT LLGGTLPAVG ATHLVSNPRH RAALRRAAEY LRAAQETLNT NAATDLLAAD
LTGATNALGE ITGETVGEDL LDVIFSRFCI GK
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