Gene Cagg_0639 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_0639 
Symbol 
ID7266111 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp786755 
End bp787606 
Gene Length852 bp 
Protein Length283 aa 
Translation table11 
GC content55% 
IMG OID643565500 
ProductSCP-like extracellular 
Protein accessionYP_002462012 
Protein GI219847579 
COG category[S] Function unknown 
COG ID[COG2340] Uncharacterized protein with SCP/PR1 domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTCGAT TTCTGCTCTT GTATCCGATC TTCGTCTGTC TCTTTGTCTT GCTATCACTG 
CCGGCCAACG TTGTTGCTCA ATCGGAAACG CCACAAACTC AACCGAGCAC TATCTTTATC
CCCCTGATCA CCCGCACGGT GACATACCCG CCACTCTCCT CCAACTGGTT AGAGCGGGTG
AATGCCTATC GAGCGCGGGC CGGAGTGCCG CCGGTAACCG AGAGTAACGA TCTCAACAGC
AACTGCTGGC AACACGCACG CTATATGGCC GAAAATAACC ATCTCACCCA TAATCAAGAT
TCTACTAAAC CCTATGCCTC ACCCGAGGGA CAAATCTGTG CCGCAAGAGG CAATGCCTGG
CTGGGAGGTG GCAATTTTTG GCAGCCGGCT GATGCGATTG ACGGCTGGAT GCAATCGGTC
GGTCATCGGC TTTGGTTGCT CTACCCCACC ACGCCAACCT TCGGGTTTGG GTTCTATATC
ACGCCGAGTG GTACGACGAG TGCAGCCGGC CTCGATGTCC TCTCATACTT CAACAATGGC
GATAATTACC CTGCTTGGCC GGTGCGCTAC CCCGGCATTG ACCAAACCGA TGTGCCGGCG
ACGCAATATC CGATTACGTT GCAATGGCGC TACTTTGGCA GTACGCCGGT GATCAGCAGC
ACGGATCTGC GCGTTGTCGG CGGCAATGTG ATTCCGCATA CCAGCACAAC TAACCTGCCA
GTTGGTCATA AAGGGATCGC CGTCACCCCT ACCGTTAATT TGCCTGCCAA TAGCCTGATC
GAAGTATCGA TCAGCGGATC GTATGATGGG CAGCCGTTTA CCTATACGTG GCAGTTCCGC
ACCGGGAATT GA
 
Protein sequence
MRRFLLLYPI FVCLFVLLSL PANVVAQSET PQTQPSTIFI PLITRTVTYP PLSSNWLERV 
NAYRARAGVP PVTESNDLNS NCWQHARYMA ENNHLTHNQD STKPYASPEG QICAARGNAW
LGGGNFWQPA DAIDGWMQSV GHRLWLLYPT TPTFGFGFYI TPSGTTSAAG LDVLSYFNNG
DNYPAWPVRY PGIDQTDVPA TQYPITLQWR YFGSTPVISS TDLRVVGGNV IPHTSTTNLP
VGHKGIAVTP TVNLPANSLI EVSISGSYDG QPFTYTWQFR TGN