Gene Cagg_0629 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_0629 
Symbol 
ID7266101 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp774069 
End bp775175 
Gene Length1107 bp 
Protein Length368 aa 
Translation table11 
GC content54% 
IMG OID643565490 
Productalpha/beta hydrolase fold protein 
Protein accessionYP_002462002 
Protein GI219847569 
COG category[I] Lipid transport and metabolism 
COG ID[COG3243] Poly(3-hydroxyalkanoate) synthetase 
TIGRFAM ID[TIGR01836] poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTAGTG CAGATGCTGC ACCGATCGAT TTCGAGCGGA TGACCGAGCA GTTGCTGAAG 
GAGATTGAGC GCACCACGAA GAGCAGCGAT ATGGCTGCCC GGATTGCGAC CAATCGTATC
AAAGTCGCGG TCGGTCAGAC GCCAAAAGAG CAGATTTGGG CGCTGAATAA GATGCGCCTG
TACCACTACT ATCCGCAGGT GCCGCCGGAG CAGCGCAAAC CGATCCCACT GCTTTTGGTC
TTCGCGCTGA TCAACCGTCC ATATATCTTC GACTTGCGTC CCGGTAACAG CTTCGTCGAG
TTCATGCTTA AGCATGGCTA CGAAGTCTAT CTGCTCGACT GGGGCACCCC CGGCCCGGAA
GATGCACATT ACGATTTTGA GGACTTCTCG CTGAAGTTTT TGCCCCGTGC AATCCGGGCT
ATGAAGCGTC ACAGCGGCAA GAACGAGTTT AGCATGTTGG GTTGGTGCAT CGGAGCGACA
ATCGTCACCA TTTACGCAGC GATGCGCCCC GATGATGGGC TGCGTAACCT GATTTTGCTG
ACCGCGCCAA TCGATTTTAG CGACAAAGAG GGGAGTACCT TCAGCCGCTG GCTCAATACC
GAGTACTACA ACGTCGATGA ACTGGTGCGC CAGTTCGGGA ATGTGCCCGC CGCTATTATC
GAGTACGGCA ATAAGATGCT GAAGCCGGTC GAGAATTATA TCGGCACCTA CTTGAAGCTG
TGGGATAACC TCGATAACCC GGCGGTGGTC GAGGCATGGC TTGCTATGAA TACATGGGTG
ACCGATAACG TTGATTTTCC CGGCGCTGCC TTCCGCCAGT GGGTGGTCGA GTTCTTCCGC
GAAAATCGGC TGATGGAAAA TAAGCTCATG ATGGAAGGGC GCGTCGTCGA TCTTGCCAAT
ATCAAGGCAA ACTTGCTCAA CGTGATCGCC GACAAGGATC ATATCGTCCC CAACTGCCAG
TCTCGCTCGG TGATGGATCG CGTTGGAAGT AAGGATAAGA AGCTGATCGA ACTGAAAGGT
GGCCATATCG GCATTATGGT CGGTAGTGGT GCCAGCAAGC GAGCATGGCC TCAGATCGAA
TCATGGCTGA GCGAGCGTAG CAACTAG
 
Protein sequence
MTSADAAPID FERMTEQLLK EIERTTKSSD MAARIATNRI KVAVGQTPKE QIWALNKMRL 
YHYYPQVPPE QRKPIPLLLV FALINRPYIF DLRPGNSFVE FMLKHGYEVY LLDWGTPGPE
DAHYDFEDFS LKFLPRAIRA MKRHSGKNEF SMLGWCIGAT IVTIYAAMRP DDGLRNLILL
TAPIDFSDKE GSTFSRWLNT EYYNVDELVR QFGNVPAAII EYGNKMLKPV ENYIGTYLKL
WDNLDNPAVV EAWLAMNTWV TDNVDFPGAA FRQWVVEFFR ENRLMENKLM MEGRVVDLAN
IKANLLNVIA DKDHIVPNCQ SRSVMDRVGS KDKKLIELKG GHIGIMVGSG ASKRAWPQIE
SWLSERSN