Gene Cagg_0626 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_0626 
Symbol 
ID7266098 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp772452 
End bp773096 
Gene Length645 bp 
Protein Length214 aa 
Translation table11 
GC content61% 
IMG OID643565487 
Productprotein of unknown function DUF1648 
Protein accessionYP_002461999 
Protein GI219847566 
COG category[S] Function unknown 
COG ID[COG5658] Predicted integral membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTAATC TGCGGTTCAT GATTGTCATC ACGGCGCTGA TGTGGGTGTT TGGCGCAGTG 
ATGCTACCCT TTATCCCCGA TCCGGCGCCA ATTCACTGGA ATGCTGCCGG TGAGATTGAT
GGCTATGGCA GCCGGTGGTT TGTGGCCTTC TTCCCACCGG CGATCGCTAC GCTCATGGCC
GCACTCGCGC CGATCTTGCC ACGGATCGAT CCGCGCGGGC AGGGGTATGT CGCCTTTGCG
CGCACATACG CGCTGATTAT GAATAGCCTC GTCGTCTTTT TTGCTGTGAT TCATGTCATC
ACCATTGGCG GAGCGGTCGC TTGGCCGATC AGCGTGCCGC GGCTGATCAG CATTGGGGCG
GCGCTGCTGA TTGCGGTCTT AGGAAACGAG TTAGGGCGGG TGACGCCAAA CTATTTTGTC
GGCATTCGTA CCCCGTGGAC GCTGGCCGAT CCGGAGGTGT GGCGGATCAC GCACCGGGTC
GGTGCGCGCT TGTTCGTGGC CGGCGGCTTG GCGTCGGCGC TGGTCAGCCT GTTCGTGCCG
GAAGATTGGC TGTTTGCGAC CAGTTTTCCG TTGATCATTG TGCCGGCGTT GGCGACCATC
CCGTATTCGT ACATTGTGTG GCGGCGGTTG CACCGGGCCG GCTAG
 
Protein sequence
MRNLRFMIVI TALMWVFGAV MLPFIPDPAP IHWNAAGEID GYGSRWFVAF FPPAIATLMA 
ALAPILPRID PRGQGYVAFA RTYALIMNSL VVFFAVIHVI TIGGAVAWPI SVPRLISIGA
ALLIAVLGNE LGRVTPNYFV GIRTPWTLAD PEVWRITHRV GARLFVAGGL ASALVSLFVP
EDWLFATSFP LIIVPALATI PYSYIVWRRL HRAG