| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cagg_0617 |
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| Symbol | |
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| ID | 7266089 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chloroflexus aggregans DSM 9485 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011831 |
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| Strand | - |
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| Start bp | 761250 |
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| End bp | 763742 |
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| Gene Length | 2493 bp |
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| Protein Length | 830 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 643565479 |
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| Product | diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) |
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| Protein accession | YP_002461991 |
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| Protein GI | 219847558 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATCCAA TGTCGTATCC GGATCAACGC TTGTTGCAAA CAATCGTTGC CAATAACGTC
AATGCGTTAT TGGTATTGGA TATGACCGGT ACCGTCTTGT TCGCCAACAA TGCTGCGCTG
CGCTTGTTTG GTCGCTGTGC CGAGCAACTA CAAGGTAGTC CGTTAGGTTT TCCCCTCCAA
CCCGGCCTCA CCGTTGATGC AGAGATTGTG CGTCCCGATC AATCGGTTGT TATTGTCGAT
CTGCGGGTTG AACCGATCGA GTGGTATGGT TCGCCGGCAA TGCTGGCAGT GCTGCACGAC
ATTACCGAGC GCAAACAGGC CGAGCAGTTG TTAATTGAGA CCCAGCAGCT CCTTCATTCA
GCACTCGATG CGCTGCCGTC GGCGATCGCA ATTCTCGACC GCTACGGCAG GGTCTTGGCA
GCGAATGTAC GCTGGCTCCA GCTCGGTCCT TTACTCGGGG TTGATACGTT TGATTGTGCT
GTCGGCGCTG CTTTCCTGGC GGCGTGCCAA TTGGGTCGGG GATCGGCAGT TGTGATCGCT
ACCGCAATTG AGCAACTGCT GGCGAGCGCA CAGGAACGGT ATGAGAATGA GGTTGCTGCG
GTCGATTCCA CGCGACGCTG GTTGTCGGTG CGGGCGGTGC GGTTTGGCGC CGGTTCACGG
GTGCGTGTGG TCATTGTGCT CGAAGATGTA TCGGCGCGGC ATCAGGCTGA CCAGATTGCC
CTGGTCCGTC GTCGGGTGCT CGAACTGATC GCACGTCAGT ACGATTTGCG CACGATTGCG
CGCGAGTTGT TGCAGCTCAT CGGTGAGCAG ATGCCCGATC TGGTTTATGC GGCGTATGCG
ATACGCTCCG CAGGAGTTTT TGTGAGTTAT CATCACGAGA TTCTGCATGA CGATCAACCA
AACCTTGATC GGTGGGCCGA GCAGATACTG ACGATGTCGC CGTACCCTCG TCAGCGGATC
GCTGAGTTAC CGCTCGATTC GCCGGTCGGG CAACGAATGC AGGAACTCAT ACAGCTCCAT
ATCGTGAATC GGGCTTGGAT TGCGGTTGTC CGTACTAATC GCGATCAGGC GGATGGTTGG
TTGTTGCTGT GCCGACGGAA CGATACGCCG CTAACCACCG ATGAGAAACA AGCTATCGAT
CAGATTGAGC AATTGACAAT TATTGCGCTC GAACAGCATA CTACACTCCA TAAGTTGGCT
TATCAGGCGC ATCACGACGC ACTCACCGGC TTGCCAAACC GGTTGTTGTT TGAAGATCGT
TTGCAGCAAG CCATTGATCT AGCCCGCCGA AATAATTCGC TGGTAGCCGT ACTTTTTATC
GATCTCGACC GTTTCAAGCA CGTCAATGAC ACGCTTGGTC ATGCAATTGG TGATCTGCTC
CTCATACAGG TCGCGCGTCG GTTTGAGCTA TGCTTAAGAG CGACGGACAC ATTGGCCCGC
CATGGAGGTG ATGAGTTTTT GTTGGTACTG CCCGAAATTA CGTCACCCCA ACATGTTGCA
ACCGTTGCCC GCCGGTTGCA CGAAGCGCTC GATCGCCCGT TTTTTATCAA CGGCCACGAG
ATTTTCGTCA GTGCAAGTAT TGGGGCGAGC CTTTATCCCA TTGATGGAAG TGATGTTGTG
TCGCTGCAAC GGGCTGCCGA TATTGCTATG TATCGGGCCA AGCATACCTT ACGGAACAGT
TTTCAATTTT TTGATGCGGC GATCACGAAC GCATCGCTCG AACAATTACA GATCGAGACA
CTCTTGCGAC GGGCAATCGA GCGCAACGAG TTGCTGTTGT ACTACCAGCC TAAGGTTGAT
CGTAGTGGTA ACCTGACCAG TTTCGAGGCA CTCTTGCGCT GGAACAGTGC TGAGCTGGGT
ATGGTCTCTC CGGTACGCTT TATTCCCGTT GCCGAGGAGA CCGGTCTGAT TATCCCGATT
GGCATCTGGG TGTTAACTGA ACTGGCTCGC CAAGTGCGTG AATGGCAACG ACAAGGGTTG
CCGCTCGTTC CGGTGGCGGC TAATGTATCG GCATTGCAGT TTGCCCACGT CGATTTTGTA
CAACAGGTGG CTGATATTTT GGCGCAGGCC GCGCTACCTG CCGGCTGGCT TGAGTTAGAA
CTAACCGAAA CAATGTTAAT GGGGCAGATC GAAGATCTGC GCCGTCAGTT GACGGAGTTG
CGGCAATTAG GTGTGACGCT GGCAATTGAT GATTTTGGTA CCGGCTATTC ATCGTTATCG
TACTTGCACC TCTTGCCGAT CAGTATCTTA AAGATTGACC GTTCGTTCAT CATGCGCCTT
GATCAGAGCG ATGCAACCGT TGAGCGTAGC ATCACCAATG CCATTATCGC TTTGGGGCAT
CATCTTGGGA TGCAGGTGGT CGCTGAAGGA GTTGAAACAG AAGGTCAGTT TCAGATATTA
CTGAGCGCCG GTTGTGATCT GTTTCAGGGC TATTACATCG AGCGACCGTT ACCGCCAGAT
GAGACGGTGG CATGGCTGCG GCGGAAGGTG TAA
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| Protein sequence | MNPMSYPDQR LLQTIVANNV NALLVLDMTG TVLFANNAAL RLFGRCAEQL QGSPLGFPLQ
PGLTVDAEIV RPDQSVVIVD LRVEPIEWYG SPAMLAVLHD ITERKQAEQL LIETQQLLHS
ALDALPSAIA ILDRYGRVLA ANVRWLQLGP LLGVDTFDCA VGAAFLAACQ LGRGSAVVIA
TAIEQLLASA QERYENEVAA VDSTRRWLSV RAVRFGAGSR VRVVIVLEDV SARHQADQIA
LVRRRVLELI ARQYDLRTIA RELLQLIGEQ MPDLVYAAYA IRSAGVFVSY HHEILHDDQP
NLDRWAEQIL TMSPYPRQRI AELPLDSPVG QRMQELIQLH IVNRAWIAVV RTNRDQADGW
LLLCRRNDTP LTTDEKQAID QIEQLTIIAL EQHTTLHKLA YQAHHDALTG LPNRLLFEDR
LQQAIDLARR NNSLVAVLFI DLDRFKHVND TLGHAIGDLL LIQVARRFEL CLRATDTLAR
HGGDEFLLVL PEITSPQHVA TVARRLHEAL DRPFFINGHE IFVSASIGAS LYPIDGSDVV
SLQRAADIAM YRAKHTLRNS FQFFDAAITN ASLEQLQIET LLRRAIERNE LLLYYQPKVD
RSGNLTSFEA LLRWNSAELG MVSPVRFIPV AEETGLIIPI GIWVLTELAR QVREWQRQGL
PLVPVAANVS ALQFAHVDFV QQVADILAQA ALPAGWLELE LTETMLMGQI EDLRRQLTEL
RQLGVTLAID DFGTGYSSLS YLHLLPISIL KIDRSFIMRL DQSDATVERS ITNAIIALGH
HLGMQVVAEG VETEGQFQIL LSAGCDLFQG YYIERPLPPD ETVAWLRRKV
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