Gene Cagg_0597 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_0597 
Symbol 
ID7266069 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp737681 
End bp738610 
Gene Length930 bp 
Protein Length309 aa 
Translation table11 
GC content59% 
IMG OID643565460 
Productmethionyl-tRNA formyltransferase 
Protein accessionYP_002461972 
Protein GI219847539 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0223] Methionyl-tRNA formyltransferase 
TIGRFAM ID[TIGR00460] methionyl-tRNA formyltransferase 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.411489 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.365023 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCATTA TCTTTCTCGG CAGCCCTTCC TATGCAGTCC ATGCACTCGA TGCACTGGTG 
GCTGCCGGGT ATACAATTGT TGGCGTTGTC ACGCAACCGG ATCGCCCGGC CGGGCGCGAC
CGAAGGTTGA CACCACCCCC GGTGAAGGTT GCCGCGTTGG CCCATGGCTT GCCAGTTCTC
CAACCGGAGA CGCTGCGTGA CCCAGAAGTA GTCGAGACCT TGCGGGCGTT GCAGCCGGAT
GTTGGTGTGG TTGCGGCGTA TGGTGAGATC TTGCGCCGGG CCGTGCTCGA GATTCCGCCG
TTGGGCTATC TGAATATTCA CCCATCGTTG TTGCCGCTCT ATCGAGGACC GACTCCGGTG
GCCGGTGCGA TTTTGGCCGG TGAAACGGTC ACCGGCGTGA CAATTATGCG ACTTGATCCC
GGTATGGATA GTGGTCCCAT TTTAGCTCAA GCGATGGTCG ATCTTCCACC AAATGCGCGT
ACCGGCCCAC TCACCGATGA GCTGTTTCGG CTGGGTGCTA CGTTGTTGGT CGAAGTACTG
CCTCGCTACG CACGTGGTGA GATCGAACTG CGTCCCCAAG ATCACAGCCA GGCAACCGTC
ACCAAGATGC TCAAAAAGGA AGATGGCCGG ATCGATTGGA CGTTACCGGC AATTGTGATT
GAGCGAATGA CCCGTGCCTA TGATCCATGG CCGAGTGCGT ATACGTTCTG GCGTGGTCAG
ATGTTGCGCA TTATGAGTGC CGCTGTGGCC CCGACCGATG CCTCGGCTAC ACCGGGCATG
GTGATTGGCC GGAGTGCCCA CGGTCATCCG TTGGTCCAGA CCGGCAGTGA TGCCCTTGAA
CTGGTTGAGG TGCAGCCGGC GAGCCGGCGC CCGATGAGTG GTGCGGCATG GTTGGCCGGA
GTTCATGCTC CTGAGATTAC GTTAGGGTAG
 
Protein sequence
MRIIFLGSPS YAVHALDALV AAGYTIVGVV TQPDRPAGRD RRLTPPPVKV AALAHGLPVL 
QPETLRDPEV VETLRALQPD VGVVAAYGEI LRRAVLEIPP LGYLNIHPSL LPLYRGPTPV
AGAILAGETV TGVTIMRLDP GMDSGPILAQ AMVDLPPNAR TGPLTDELFR LGATLLVEVL
PRYARGEIEL RPQDHSQATV TKMLKKEDGR IDWTLPAIVI ERMTRAYDPW PSAYTFWRGQ
MLRIMSAAVA PTDASATPGM VIGRSAHGHP LVQTGSDALE LVEVQPASRR PMSGAAWLAG
VHAPEITLG