Gene Cagg_0592 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_0592 
Symbol 
ID7266064 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp734670 
End bp735302 
Gene Length633 bp 
Protein Length210 aa 
Translation table11 
GC content57% 
IMG OID643565455 
Productprotein of unknown function UPF0029 
Protein accessionYP_002461967 
Protein GI219847534 
COG category[S] Function unknown 
COG ID[COG1739] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00257] uncharacterized protein, YigZ family 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.655997 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATACCA TGACGCGCTA CCCCATCCCG GCTGCACCGG CACGAACAGA AATTGTTGTG 
CGCGGTTCTC GTTTTATCGC ACAGGCGATC CCTACCTCAA CTGTAGAAGC GGCCCGTGCC
GCGATTGCGG CAGTCCGTGC CGAAATGCCC GACGCGACCC ATCATTGCTA TGCGTACCAG
ATCGGGTATG GCGCCAGCAC TGTTGCCGGG ATGAGTGACG ATGGTGAACC GGCCGGTACC
GCCGGTCGAC CGATGATGGC GGTACTGCGT GGAGCCAATC TCGGTGACAT CACCGTGATT
GTCACCCGCT ATTTCGGTGG GACCCTGCTT GGTGTCGGGG GACTGGTTCG GGCGTATAGC
GACGCTACCC GCGCCGTCCT TACCATAGTA CCACGTACCC AACGGGTTAT CTATCAATAC
ATCACCCTCC ACGTCCCATA CGCCGACTAC ACCATGATCC GTCGGCTACT GGAAGCCAAT
GCGGCTGTGA TCATTGATGA AACATTTGCC GCCGCGATTA CGATGACAGT CGGTTTGCCG
GCCGATCAAG CTGCTACTAT CAGCAAACAG ATCGATGAAT ATAGCGCAGG CAGGATTCGC
ATCGAGTCGG CACACGAGTA TGGTATGATA TAG
 
Protein sequence
MDTMTRYPIP AAPARTEIVV RGSRFIAQAI PTSTVEAARA AIAAVRAEMP DATHHCYAYQ 
IGYGASTVAG MSDDGEPAGT AGRPMMAVLR GANLGDITVI VTRYFGGTLL GVGGLVRAYS
DATRAVLTIV PRTQRVIYQY ITLHVPYADY TMIRRLLEAN AAVIIDETFA AAITMTVGLP
ADQAATISKQ IDEYSAGRIR IESAHEYGMI