Gene Cagg_0569 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_0569 
Symbol 
ID7266041 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp704019 
End bp706364 
Gene Length2346 bp 
Protein Length781 aa 
Translation table11 
GC content57% 
IMG OID643565432 
Productmetal dependent phosphohydrolase 
Protein accessionYP_002461944 
Protein GI219847511 
COG category[R] General function prediction only 
COG ID[COG1203] Predicted helicases 
TIGRFAM ID[TIGR01587] CRISPR-associated helicase Cas3
[TIGR01596] CRISPR-associated endonuclease Cas3-HD 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.495857 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATCCTT CACCGTGGCC TCATTGGATA GATAATCTTC TGGCGAAGAG CCAGCGCTAC 
GGAGGCGAGA CGTTGGCCGC GCATACGTGG GCGGTGTTGT GTCGGCTGGC TGACCTCTAC
CGGTTGCGTC CTCAGATCGC CAACAGTGAC AGTAACCGGC TCTGGCACTG TCTGTATTGG
GCAGCGTTTC TGCACGATTT TGGCAAAGCG GCACGCGGTT TTCAGCAACG GTTGCGTGGT
GGACCGACAT GGCCACACCG CCACGAGGTG CTCTCGTTGG CGTTTGTGGA TGCCATTGCC
CATGGTCTGT CCGAGGATGA ACAGCGTTGG GTGGTAGCAG CCATCGTGTC TCACCATCGC
GACGAAGCCG AAATTGCGCA GACTTATCCA CTAGGTGTGC GCAATGACCC GCTGATTGAG
CTATGTCGTG AAGTGGACGA CGAGACGGTT CGCCTGCTTG ACGAGTGGCT GGCTACGTGT
GCCAACCCTT GGCGTGAGGC TTTAGGGTTA GCTATGGTGG TGGAAGAGAT TACACCGCAA
TCGGTAACGG TTGACGCCAA GCGGGTGCGC TACTGGTTGC AGGTCTATCA CGATTGGGTT
GCGGCGAACG ATCCTGTAGC ACGGGTACCC GGCATTTTGC TGCGCGGATT GATTACCACC
GCCGATCATA TGGCTTCGGC GCACCTGCAC CGTGTGCCGC CACCGATCAC CGGATCGTGG
TCGGCATTGG CCAAACGTCT CTTACCGCAG GGAGAGCAGA TCTACGAACA CCAACGGCAA
AGTGGCGAGA TGAAAGGACA ATCGGCGCTG CTCATGGCCC CAACCGGCAG TGGCAAAACC
GAAGCCGCAC TCTATTGGGC ACTCGGTGAT GGCACCGCAC CTCCGGCGCG CATCTTTTAC
ACTCTGCCCT ATCAGGCGAG CATGAATGCA ATGTACGACC GATTGCGGCA GAACTTTGGC
GATGAGCTGG TCGGATTGCA GCATGGCCGG GCAGCGCAGG CGCTCTACGC CCGCTTCCGC
GAGGGTGAGG AATGGTCGGC AGCGGCGCGG CGCGTGCAGT GGGAGAAAAA CCTGAACATC
CTGCATGCTC GCCCGCTCAA GGTGCTCAGT CCATACCAAC TCCTCAAAGC CCTCTTCCAA
CTGCGTGGGT TTGAAGCCAT GCTCACCGAT TATGCGCAGG CGGCATTTGT GTTTGATGAG
ATTCACGCTT ACGAACCAGA ACGTCTAGCC CTGATTACCG GTCTGATGCG GTATCTACGC
GAGCAGTTTG CCGCACGTTT CTTTGTCATG TCGGCTACGT TTCCCCAGCT TATTCGCAGA
CGGTTAACGA TAGCACTTGG CAACGTTCCG CTGATCCGGG CCAGCCCGGA GATCTTTACC
CGCTTTCGTC GTCACCGACT ATTCTTGCGC GAAGGTGAGA TCACCGACCC GACCACCATT
ACCGAGATTG TCGATAAAGT GCGGGCGGGC CGGCAAGTAT TGGTTTGCGC GAATACGGTG
GCGCGAGCGC AAGCGCTGCG CGATCAGCTC GCGCAAGCCG GTCTCACCGA TGACCAGCTT
CTCTTGATCC ATAGCCGCTT TACGCATGGC GACCGCACCC GACTCGAACA GCGCATCCGT
TCGTACTGTG GCAGCGATGT TGCTGAGCGA CCGCCACTGG TGCTGGTGGC TACGCAGGTA
GTCGAAGTGA GTCTCGATAT TGATCTCGAT ACGATATATA CCGATCCGGC CCCCCTCGAA
GCACTCTTAC AACGCTTTGG CCGCGTCAAT CGGCGTGGGG CGAAGGGGAT CTGCCCGGTC
TACGTCTTTC GTCAGCCCAA CGATGGTCAA GGTGTCTATG GTCGTGATCG CGATCCGAAT
CGTGCGGGAC ATATTGTGCG TGTGACACTA GCTGAACTTG AGCCGCACAA CGGTGAGATC
ATTGACGAAT CCGCGATCAA TGACTGGCTC GATCGCATTT ACGCCGATCC CGTGCTCAGC
CAGCAATGGA CGGAAGCCTA CCAACGGATG GCGCAGCAGG TCGAGCTGAT CATCAACGGG
TTACGCCCAT TCCAGAGCGA CGAACAGCGC GAAGATGAGT TCGAGCAAAT GTTTGATGGG
GTTGAGGTCG TGCCACAGTG TTTTGAACAG GCATACGTTG ATTGTCTGGT TCAGGAACGG
TTGATTGAAG CGAATGACTA TCTGGTCAGC ATCAGCAAAC AACGGTTTGC CATCTTACGC
AGCCAAGGCA AACTGCGTCC GGCGGAGGAG GCTGGCAAGC GGCGAGTATG GGTCGCGCAG
CTTCCCTACG ACGAGCGTAA CGGTCTCTCG TTCAGTGACA TCGTGATTGA TCCGGATTGG
AGTTAA
 
Protein sequence
MNPSPWPHWI DNLLAKSQRY GGETLAAHTW AVLCRLADLY RLRPQIANSD SNRLWHCLYW 
AAFLHDFGKA ARGFQQRLRG GPTWPHRHEV LSLAFVDAIA HGLSEDEQRW VVAAIVSHHR
DEAEIAQTYP LGVRNDPLIE LCREVDDETV RLLDEWLATC ANPWREALGL AMVVEEITPQ
SVTVDAKRVR YWLQVYHDWV AANDPVARVP GILLRGLITT ADHMASAHLH RVPPPITGSW
SALAKRLLPQ GEQIYEHQRQ SGEMKGQSAL LMAPTGSGKT EAALYWALGD GTAPPARIFY
TLPYQASMNA MYDRLRQNFG DELVGLQHGR AAQALYARFR EGEEWSAAAR RVQWEKNLNI
LHARPLKVLS PYQLLKALFQ LRGFEAMLTD YAQAAFVFDE IHAYEPERLA LITGLMRYLR
EQFAARFFVM SATFPQLIRR RLTIALGNVP LIRASPEIFT RFRRHRLFLR EGEITDPTTI
TEIVDKVRAG RQVLVCANTV ARAQALRDQL AQAGLTDDQL LLIHSRFTHG DRTRLEQRIR
SYCGSDVAER PPLVLVATQV VEVSLDIDLD TIYTDPAPLE ALLQRFGRVN RRGAKGICPV
YVFRQPNDGQ GVYGRDRDPN RAGHIVRVTL AELEPHNGEI IDESAINDWL DRIYADPVLS
QQWTEAYQRM AQQVELIING LRPFQSDEQR EDEFEQMFDG VEVVPQCFEQ AYVDCLVQER
LIEANDYLVS ISKQRFAILR SQGKLRPAEE AGKRRVWVAQ LPYDERNGLS FSDIVIDPDW
S