Gene Cagg_0564 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_0564 
Symbol 
ID7267061 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp686399 
End bp687946 
Gene Length1548 bp 
Protein Length515 aa 
Translation table11 
GC content49% 
IMG OID643565427 
Producthypothetical protein 
Protein accessionYP_002461939 
Protein GI219847506 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.118171 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACACAA GCAAATTGAG AGGACCACTC GACACGCAAT TGATCATCGT CGGTATTCTT 
GTTGGTCTCG CCATACGCCT ATGGATCGCC TGGCAGCCAA CAGATGAACT TTCGTGGCGT
GCAAACGCCG ACGATGCTTA TTACTACTTC AAACTGGCAC AACACCTCGG TTCAGGTGTG
GGCGCTACGT TCGATGGTGT GAATCTGACC AATGGCTTTC ACCCGCTCTA TGCATTACTG
CTTGTGCCCA TCTTTCAGTA TGCCGGTAGT GACATTGATC TCGGCGTACA CCTGGCGCTT
ACCCTGGTTG CGCTGGTGAG TAGCGTAACA GCTTGGCCAA TATACCTCGC CGGGAAGTAT
GTTCACTCTC CACTTGCCGG CACCATCGGA GCATTGACAC ATCTCCTCAA TCCGTGGGTT
GTCATTCTGA CGATGACTGG GGTGGAGTCG GCTGTGTATG TGTGCTGTTT TGCCTGGACG
GTGATGGTAT ATGTAAGGTG GAGATCACAC AAGCAATCGC TTCGTGGAAT CGTATTGATA
GGTTTACCGG CCGGGTTGAC AGTAATGGCA AGATCTGAGG GTATGTTCTT GTTGGCGGGA
ATCATTCTTG ATCGATTGGT TGTGGATCGG CACGTGCCCG GACGAGCAGT TGCTTTTGCA
GTTCTTTCTG GGCTGTTTAC TACCATTGTG TGCCTACCAT GGGTTTGTTG GAGTGTATTC
CAGTTTGGTA GCCCTCTTCA GATTAGTGCT AGCGCGATCA TGCTGCACAA TTACGCGGCT
ATGCCCGCAG ATGCTGTAGC AGCGTTCGAA TGGTATGTTG GACGTGTATT CTGGTTCTTG
CCCCGTTATG GATACAAGAT CCTTCTGTTT AATCTTCCCC TTGTCCTCTT GTTCGGGTTC
GTGATCGGAC GATCATGGTT GACTCGTCAA CGATCCCTGA AAATAGCCTG GTCGTCTGTC
TCGCAGTATC AATTTCTCAT CCTGCCATTT ATGTGTATCA CCGCTTACTA TAATTTGGTA
CTGCTTCATC AACAGCACTG GTACTTTAAT GCACTGGTAT TAATATTCAC CCTTATCGGT
GCATCTCTTG GTGCCGAAGC GATGCTTCGT TCAGAGAATG TTGTATATTT GCAACAAACG
TATCAGCGAA TCGCTACATC TATTCTCTGT GCTCTTTTCG TTATCGTCAT TGTGCTTATG
TGGCAGAGGG GGGTATATCC CAACCAAAAA GACTGGTCCA TCCTTGGTCG GCAGATCGCC
AGCACCGATT TGCGATACGA ACGTCTGGGT GCAACCGACA ATGGCATTGT CGGATTTTTC
TGCCGCTGCA CAATGGTTAA TCTTGATGGT GTGATGAATA ATGCGGCCGT TGCGTATTAT
CGTGTTCACG GGTATAAGGA GGAGTCTATT CTCCAGTTCG CACGCGAGCA GCATGTGGCA
TATATCTGGG ATGTGGGATA TTGGGATTTC ATGCCTCTTG ATCCAGATCA AGTGCAGATC
GTCAGACGGA TCCAGTTTGC AGCAGGCACG TTGTATCAGA TTAGGTAG
 
Protein sequence
MNTSKLRGPL DTQLIIVGIL VGLAIRLWIA WQPTDELSWR ANADDAYYYF KLAQHLGSGV 
GATFDGVNLT NGFHPLYALL LVPIFQYAGS DIDLGVHLAL TLVALVSSVT AWPIYLAGKY
VHSPLAGTIG ALTHLLNPWV VILTMTGVES AVYVCCFAWT VMVYVRWRSH KQSLRGIVLI
GLPAGLTVMA RSEGMFLLAG IILDRLVVDR HVPGRAVAFA VLSGLFTTIV CLPWVCWSVF
QFGSPLQISA SAIMLHNYAA MPADAVAAFE WYVGRVFWFL PRYGYKILLF NLPLVLLFGF
VIGRSWLTRQ RSLKIAWSSV SQYQFLILPF MCITAYYNLV LLHQQHWYFN ALVLIFTLIG
ASLGAEAMLR SENVVYLQQT YQRIATSILC ALFVIVIVLM WQRGVYPNQK DWSILGRQIA
STDLRYERLG ATDNGIVGFF CRCTMVNLDG VMNNAAVAYY RVHGYKEESI LQFAREQHVA
YIWDVGYWDF MPLDPDQVQI VRRIQFAAGT LYQIR