| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cagg_0562 |
|---|
| Symbol | |
|---|
| ID | 7267059 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chloroflexus aggregans DSM 9485 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011831 |
|---|
| Strand | - |
|---|
| Start bp | 683547 |
|---|
| End bp | 684890 |
|---|
| Gene Length | 1344 bp |
|---|
| Protein Length | 447 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 643565425 |
|---|
| Product | 4-aminobutyrate aminotransferase |
|---|
| Protein accession | YP_002461937 |
|---|
| Protein GI | 219847504 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0160] 4-aminobutyrate aminotransferase and related aminotransferases |
|---|
| TIGRFAM ID | [TIGR00700] 4-aminobutyrate aminotransferase, prokaryotic type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.921583 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTGCGC CTGCTGTGCG CCATATTCGT CTTGTCACTG AGATTCCCGG CCCACGTTCG
CGCGAGCTGT TGGCGCGGCG CGATGCCGCC GTTGTGGCCG GTCTGGGCCG CGCTACGCCG
ATCGCTATTG CTTCGGGTAG TGGAGCACTC GTGACGGACG TTGATGGCAA TACGTTGATT
GATTTTGTCA GTGGCATTGG TACGTTGGCT GTCGGTCATT GCCCGCCCGA AGTGGTGCAG
GCGATCCAGC AGCAGGCTGA ACAGTTGATC CATCTGTCGG CATTGGTCGG TACCTACGAG
CCGTATGTTG CGTTGTGCGA GCGATTGAAT GCACTGGCAC CGATTAGTGA ACCGTGCAAG
ACGTTGCTCG CAAATTCCGG CGCTGAAGGC GTGGAGAATG CGATTAAATT CGCCCGCGCT
GCGACCGGAC GCCCCGCCAT TATTGTGTTT GATGGTGCTT ATCATGGGCG TACTTTGCTG
ACCCTCTCCT TAACCTCGCG TACCTATTTC AAAAAGAAGT TTGGTCCGTT CGCACCCGAA
ATCTACCGTG CCCCTTTCCC GTATGCCTAC CGCATGGGTG TAAGCGAGGA AGAGGCGGTT
GAGCAGTGTT GGGCCGCGTT TGAACGTATG CAGATCGCCG GCGTTGATCC TGAAACGGTC
GCTGCGGTTT TGATTGAGCC GGTGCAGGGA GAGGGTGGTT TTATTCCGGT ACCGGTAGAA
TTTATGCGTC GCCTGCGCCA ATTCTGTGAC CGCAACGGTT CGCTGCTGAT TGTTGATGAA
GTGCAGAGTG GCTTTGGGCG GACCGGTACG CTGTTTGCTA TCGAACAGTT TGGGGTTGAA
CCGGATATTA TCGTCGCTGC GAAGAGTATT GCTGCCGGTA TGCCTCTCGC TGCTACTATC
GGGCGGGCGC GGGTAATGGA TAAAGCCCAT TACGGCGGGG TCGGTGGAAC GTATGGCGGA
AATCCGCTGG CCTGCGTTGC TGCCTTGGCT ACGCTTGAGA TTGTCGAACG TGAACGATTG
GTGGAACGGG CGCACATCAT TGGTCGTCGT ATCAGGGATC GCCTTGAACC GTTGCTTGCC
GATGACTCAC TCGATCCGCT CGTAGGTGAT GTGCGTGGCT TGGGCGCGAT GATCGGGATT
GAGTTGGTGA AGGATCGCCG CAAACGTACA CCGGCTGCTG CCGAAGAGGT ATTGGCGATT
CTGGGTCGGG CACTTGAACG CGGTGTGCTG GCGATGCGGG CCGGCCTCTA TGTCAATTGC
ATCCGCTTGT TGGTCCCACT CGTGATTACC GATGATCAGC TTGATGAGGG TCTCGATGTG
TTGATCGGTG CTATGCGTGG TTGA
|
|---|
| Protein sequence | MTAPAVRHIR LVTEIPGPRS RELLARRDAA VVAGLGRATP IAIASGSGAL VTDVDGNTLI
DFVSGIGTLA VGHCPPEVVQ AIQQQAEQLI HLSALVGTYE PYVALCERLN ALAPISEPCK
TLLANSGAEG VENAIKFARA ATGRPAIIVF DGAYHGRTLL TLSLTSRTYF KKKFGPFAPE
IYRAPFPYAY RMGVSEEEAV EQCWAAFERM QIAGVDPETV AAVLIEPVQG EGGFIPVPVE
FMRRLRQFCD RNGSLLIVDE VQSGFGRTGT LFAIEQFGVE PDIIVAAKSI AAGMPLAATI
GRARVMDKAH YGGVGGTYGG NPLACVAALA TLEIVERERL VERAHIIGRR IRDRLEPLLA
DDSLDPLVGD VRGLGAMIGI ELVKDRRKRT PAAAEEVLAI LGRALERGVL AMRAGLYVNC
IRLLVPLVIT DDQLDEGLDV LIGAMRG
|
|---|
| |