Gene Cagg_0559 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_0559 
Symbol 
ID7267056 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp680445 
End bp681923 
Gene Length1479 bp 
Protein Length492 aa 
Translation table11 
GC content59% 
IMG OID643565422 
Productprotein of unknown function DUF524 
Protein accessionYP_002461934 
Protein GI219847501 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.864324 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCGAGC CGGTGTTGTT ACTCGATGGT ATGCCACCGG TCGGTGCAGT GGTGCTCGAA 
CGAAGTGTCG TCGAATGGTC GTGTGAGCTG CCTGCGACGG CGACGGCGCA ACTTGTGATC
GATGGAGTAA CGCTAGAGCC GTTTTTACGG CCCGGTGAGC ACATCTGGCG TTGGCGCTGG
TCGGTGCCAT CCATCGCCGG TGAGTATACG GTGCGCTTCA CAGCGACGTG GCCGGATCGA
CAGTTCGAGT GGTGCGATGT TGTGCAGGTG GCGCCGTCTT TGCTCGATGC TCAACAGTAT
GTATCGCTGC TCGCCGATCT CGCTGCAATC GCGCCGGCAT TAGCCCATGC GTTGCACGGC
GGTCGGTTCG GTGCAGGGAG TGTTGGGTAT GGTGTTTCTG ACCCGGCAGC GTTCGCTGCC
TTGTTGACAG GCTCGGCAAC GCGGCGGTTG TTGACGACTA TCGAGCGGTT GGCCCGCCGC
CCGCGCCGAC AACGGTTGCA AGCAGGGGGG TGGCACGAGT TAGGTGCGTT GCGTGAACGG
CCTGATCCGG CTCGGTGGCG GCCTGCTGCC TCTGCCGCGC CACTACCGAA TACCGGCTGG
CCAGATCGAG TGTGGGTAGT TACTCCGCAA ACCGATCCGC TTGACCGTGG TTTGGTAGTG
GCCGCTTCCT TACTGGACCG TCTCATCAAC CTCGGACGGT GGGTGGTATT ACGCGATGTT
CCTCACGCTA CACGGGCTAC ACTCGTGATG GTGTTGGGGA GAATGCGCGC CCTCCGCATC
CGGCTCGATG TTCCGGCGCG CTTGCCGCCG TCACCATCGG CGTGGACGCC GCAGAGTGCT
GATGAACGGG TGCTCACTGC GTATCGGCGG TTGCTGCGCC GCCAACTGGG AGTAGGGTGG
ACACCTGAGT TGCTCTCTAT TCCGGTGCGA GATGTGGCAC GCCTATACGA GCTGTGGTGT
ACTGCACGTG TGACGTTGAG CCTGCTGCGA CTCGGTGGTA GCGAGGTATT GACGCAGACA
TTACTCGCTG CTGATTCAAC CCTACAGATA ACTACCGAAC ATCCTCTCTT AGCTCTCGCC
CTGCCCAACA ATACGACGAT TACCCTCCGC TATCAGCCAC GCTATACACC TGATAGCACA
CCATTTCGTT CCCTCGATGA TCGGGTGCGG GTGCCTGATT TGGCCATCGA GATTGCCGCT
CCCAATCGAT CTCCCAACCT GATCATCCTT GATGCGAAAT ACCGTAGCGA AGCAGGTGAG
CTGCCGGCAT ATGTTCTCGA TGAAGGCTAT AGCTATCTGG CCGGTTTGGG CCGTGAGTAT
GGCGAGCGTG CCGTCAGTGT ATTGGCGCTG CTCTTTCCCG GCCACAACGC ACCGATAACC
TACGCTAGTG GTTTGACCGT CTTGCCGTTG TTGCCAGGTG CGTCATGTGA CCACTTAGAC
TCATGGCTTC GACATAACGT ACTCGACAGA ATTACCTGA
 
Protein sequence
MSEPVLLLDG MPPVGAVVLE RSVVEWSCEL PATATAQLVI DGVTLEPFLR PGEHIWRWRW 
SVPSIAGEYT VRFTATWPDR QFEWCDVVQV APSLLDAQQY VSLLADLAAI APALAHALHG
GRFGAGSVGY GVSDPAAFAA LLTGSATRRL LTTIERLARR PRRQRLQAGG WHELGALRER
PDPARWRPAA SAAPLPNTGW PDRVWVVTPQ TDPLDRGLVV AASLLDRLIN LGRWVVLRDV
PHATRATLVM VLGRMRALRI RLDVPARLPP SPSAWTPQSA DERVLTAYRR LLRRQLGVGW
TPELLSIPVR DVARLYELWC TARVTLSLLR LGGSEVLTQT LLAADSTLQI TTEHPLLALA
LPNNTTITLR YQPRYTPDST PFRSLDDRVR VPDLAIEIAA PNRSPNLIIL DAKYRSEAGE
LPAYVLDEGY SYLAGLGREY GERAVSVLAL LFPGHNAPIT YASGLTVLPL LPGASCDHLD
SWLRHNVLDR IT