Gene Cagg_0542 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_0542 
Symbol 
ID7267039 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp660961 
End bp661902 
Gene Length942 bp 
Protein Length313 aa 
Translation table11 
GC content60% 
IMG OID643565405 
ProductApbE family lipoprotein 
Protein accessionYP_002461917 
Protein GI219847484 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1477] Membrane-associated lipoprotein involved in thiamine biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.206913 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGCGGC TACAGTTTCG CGCGATGGGT TCAACGATCA CGATCGTGAT CGATAGCGAT 
GATCCGACAG CTCGCCCAGC ACTCAACGTC GCCCGGCAAA CCTTTCTGCG CTACGAGCAG
ATTCTGAGCC GCTTTCGTTC GCACAGTGAA CTGTCGGCGC TCAACCGACG TGCCGGTCGT
GGGCCGGTGC GGGTTGGATA CACGCTGTGG CGTGCCGTGC AGCATGCCTT GCAGGCTGCG
TCTGCCAGCA ATGGTATTGT TACGCCGACA GTCGGTGCCG CACTGGTCGC TGCTGGCTAC
GATCGCGATT TTGCTACCCT CACCAATGGG GTCGTGCATC GGTTAGCCGC TGCCCATCCT
TCTCCCGATT GGCGACACAT TCGGCTTGAT CCGCATCGAC GTACTATCAC TCTCCCCGCC
GGGGTACAGC TCGATCTAGG AGGGAGTGCC AAGGGTTGGA CGGCGGCTAT CGTTGCCCGT
CGCTTAGGGC GTCGCTTTCC CACGCTCGTC GACGCCGGTG GCGATATTGC CATCAGCGGT
CCACAGCGCA ACGGTGCGCC TTGGCCAATT GAGGTAGCCG ATCCGCACAA TCCCGACAAT
GGTCTCGAAC TTCTCTTACT CCGGCGTGGC GGGGTCGCTA CCTCCGGTAT CGATTATCGG
CGTTGGCAAC AAGGTGATCG ATGGCAGCAC CATCTGATTG ATCCGCGTAC CGGTTCGCCT
GCTGCCACCG ATATTTTGGC CGCAACTGTG GTTGCGCCCA GCCTTACCAT TGCCGAAATG
GCGGCCAAAA CGGTCGTCAT CCTCGGCTCT GAGGCAGGTT TGCCCTGGCT CGCGACTCGT
CCTCAACTGG CTGCTCTATT GATACGGCTT GACGGTACGA TCATTCGCAC GCCGAATCTT
GCCCGCTATT GCTGGCAACC AACGGCAATC CCAACTGCAT GA
 
Protein sequence
MQRLQFRAMG STITIVIDSD DPTARPALNV ARQTFLRYEQ ILSRFRSHSE LSALNRRAGR 
GPVRVGYTLW RAVQHALQAA SASNGIVTPT VGAALVAAGY DRDFATLTNG VVHRLAAAHP
SPDWRHIRLD PHRRTITLPA GVQLDLGGSA KGWTAAIVAR RLGRRFPTLV DAGGDIAISG
PQRNGAPWPI EVADPHNPDN GLELLLLRRG GVATSGIDYR RWQQGDRWQH HLIDPRTGSP
AATDILAATV VAPSLTIAEM AAKTVVILGS EAGLPWLATR PQLAALLIRL DGTIIRTPNL
ARYCWQPTAI PTA