Gene Cagg_0540 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_0540 
Symbol 
ID7267037 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp658786 
End bp659973 
Gene Length1188 bp 
Protein Length395 aa 
Translation table11 
GC content55% 
IMG OID643565403 
Productbeta-lactamase domain protein 
Protein accessionYP_002461915 
Protein GI219847482 
COG category[R] General function prediction only 
COG ID[COG0491] Zn-dependent hydrolases, including glyoxylases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0933785 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGACAC TCGAACACTT GCAAACCGGC GTTGGCGTGC TTAGTCCGGC AGAGTTGTAT 
GCCGAGCTGC TAGCCGAGCG CCCGTTAATG ATTCTTGACG TTCGCAATGA GGTGGAAAAT
GCCCGCAATC GAGTGCGTGG CCGTCAACCT ATTCCCACCC TAAATATCCC TTATTTTGAG
TTTATCGAGG ACGAAGAGCA GGCAATTGCG CGTGTACCTG CCGATCGGCC GATAACGGTG
ATTTGTGCCA AAGAGGGTTC ATCGCAGTAT GTAGCCGAAT TGTTGATAGC CCGTGGTATT
GTTGCACGCT ACCTGATGGG TGGATTCCGC GCCTGGCTTG ATTTTCACGT CGTCAACGAA
GTTGTCAATG CGCCATGGGG TCGTATCGTG CAAGTGTTTC GACCGTCTCG CGGTGATCTG
AGCTATGTGA TCATCAGCGC TGGCGAGGCC GCCGTGATCG ATCCCGGTCT CCAGATTCAC
CTCTACCAGG AGATTGCTGC TGCGGCGCAA GCCGATGTTA CCCGTGTGTT ACTTACCCAC
CTCGCTGCCG GTCGTTTATC GGGTGGGACA TTGCTTGCCG GTACACGCCA TACCTTGCTG
TACATGCATC CGTATGATGC TCTCCATCCG CGCACATTGT TGCCGGCCCG CCTTGACTAT
ATGCCGTTGC TTGGTGGCGA ACGCCTACCG CTTGGTCATT TGCTTATTGA AGCCCACTGG
TTCCCTGGTC ATACTCCCGG ACATCTCGTC TATCGGGTGA TTGCGCCCAA CGGTGAACGC
TATTTGCTTA CCGGCGATGC GTTGTTGTTA TCCGGCTGTG GCCGTACCGA CCTCGCCGGG
CATTCGGTCG CGTGGACTGA GCTACTCTTC CGTAGCTTGC ACACGACGCT CACCGAATTG
GTCAACGATC AGACGCTGAT TTTACCGTCG TCGAGTGTGA GTTTGGCCGA AGTCCAACCT
AACGGGACGA TTGCTGTGCC GTTTGCCGTC TTGCGCAATC AACATCCGGC TTTACGCGCT
TCAGATCCGA CGGAGTTGTT GGCGATAGTG AACCCACCAA CGGCTGCGGT AGCAACCACG
GTCGATACCT TTTGGCAAGT TAATCTCGGC TTGCGTCAGC TCAGTGCTGA AGAAGCGACT
GAGCTAGAAG GAGAACCGTC ACGTTGTATC TGGGTGAATG AAGAATGA
 
Protein sequence
MTTLEHLQTG VGVLSPAELY AELLAERPLM ILDVRNEVEN ARNRVRGRQP IPTLNIPYFE 
FIEDEEQAIA RVPADRPITV ICAKEGSSQY VAELLIARGI VARYLMGGFR AWLDFHVVNE
VVNAPWGRIV QVFRPSRGDL SYVIISAGEA AVIDPGLQIH LYQEIAAAAQ ADVTRVLLTH
LAAGRLSGGT LLAGTRHTLL YMHPYDALHP RTLLPARLDY MPLLGGERLP LGHLLIEAHW
FPGHTPGHLV YRVIAPNGER YLLTGDALLL SGCGRTDLAG HSVAWTELLF RSLHTTLTEL
VNDQTLILPS SSVSLAEVQP NGTIAVPFAV LRNQHPALRA SDPTELLAIV NPPTAAVATT
VDTFWQVNLG LRQLSAEEAT ELEGEPSRCI WVNEE