Gene Cagg_0539 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_0539 
Symbol 
ID7267036 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp658084 
End bp658695 
Gene Length612 bp 
Protein Length203 aa 
Translation table11 
GC content56% 
IMG OID643565402 
ProductBioY protein 
Protein accessionYP_002461914 
Protein GI219847481 
COG category[R] General function prediction only 
COG ID[COG1268] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.203446 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCGGA CATTGACCAC AACCGAGACG TTGGCCCAAG CAGTTTTGCC GCGTCGTGGC 
TGGCTGGCTT ACCCATTAGT GGCCGATGCA CTGCTGGTGG TATTGGGTAG CCTATTCGTT
GCACTGACGG CACAAATCCG TATTTCGCTT ATGCCCTTCT CACCAGTACC GATTACCGGC
CAGACGCTGG GTGTACTGGT GGCAGGTAGT CTGTTAGGGC CGCGGCTTGG TGGGTTGGCA
CTTGTGCTCT ATTTGCTCGA GGGTGCAATC GGGTTGCCGT TCTTTGCCGG TGGCGCCGCA
GGTTACACGC ACATTTTTGG GGCAACCGGT GGCTATCTGA TCTCATTTCC TATCGCTGCT
GCTTTGACCG GTTGGCTGGC AACACGTGGT TGGGATCGGC GTTTTTTGAC TGCTGTAGCG
TCAATGGTGT TGGCCAACAT AGTTATTTAT CTGATTGGGG CAACATGGTT GGCATTCTTT
ATCGGTGCCG AAAATGCCAT CCTTAAGGGC GTGCTCCCCT TCCTGCTCGG TGACGCAATC
AAGATCGTTC TTGCCGCTGT TGCTCTGCCG GGCGGTTGGC AATTCCTCAA GTGGCTGCGG
GAGCGTCGGT AG
 
Protein sequence
MNRTLTTTET LAQAVLPRRG WLAYPLVADA LLVVLGSLFV ALTAQIRISL MPFSPVPITG 
QTLGVLVAGS LLGPRLGGLA LVLYLLEGAI GLPFFAGGAA GYTHIFGATG GYLISFPIAA
ALTGWLATRG WDRRFLTAVA SMVLANIVIY LIGATWLAFF IGAENAILKG VLPFLLGDAI
KIVLAAVALP GGWQFLKWLR ERR