Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cagg_0534 |
Symbol | |
ID | 7267031 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chloroflexus aggregans DSM 9485 |
Kingdom | Bacteria |
Replicon accession | NC_011831 |
Strand | + |
Start bp | 655356 |
End bp | 656522 |
Gene Length | 1167 bp |
Protein Length | 388 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 643565397 |
Product | peptidase M50 |
Protein accession | YP_002461909 |
Protein GI | 219847476 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0750] Predicted membrane-associated Zn-dependent proteases 1 |
TIGRFAM ID | [TIGR00054] RIP metalloprotease RseP |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.000573099 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTCGCTA CAACCTTGAA CTCGCTTTGG CAACAGCTTA TCAGCGGGAT TTTCGATCCA CTGGTAACAA TTCTGGTCTT TCTGATTATG CTCAGCCTGC TGGTGTTCGT CCACGAATTA GGGCACTTGT GGGTTGGCTT GCGTATGGGG ATCAAAGTCG AGGAGTTTGG GATTGGCTTT CCGCCGCGCG CATTGGTATT ATTTGAACGA AACGGGATCA AATACACTCT CAACTGGCTA CCGCTAGGCG GTTTTGTCCG CTTTGCCGGT ATGGACGGTG AAAAAGATGC AGTGTACGGT AGTGGTAGTC TGGCCACAGC GCCACCGTGG CGTAAGATAC CGGTGATGCT GGCCGGTCCG CTGATGAATT TTATCTTAGC AGTGGTGATC TTTGCCGTCC TCTTCGCTAC TACCGGCATT CCAACGCCGA CCGGACGGAT GGAGATCGGT AACGTTTTTC CGAATACCCC GGCGGCGATG GCCGGCTTTC AGCCCGGCGA TGAGTTGGTG TCGCTTGATG GTCAACCGGT TACGAGCGAG CAGGTCATCC GTGATGTCGC CCGCAAACGG TTAGGATCAA CAATTGAAGC GGTGGTGGTG CGGAATGGGT CGGAACTGAC GCTGAACGTT ACCCCAGGGC CATGGACAGC GCCCGACGGA CGCGAGTTTA GTGCCGGGTT TGGGTTCAGT TACGGGCCAC AAGTCGTGAA TCAGCCGATT CATCCGCTGG CTGCAGTCGG TGCCGGGTTG ATGCATAGTT TTGAACTGAC CGGGCGGATG GTAATGATGC TGGCCGATCT ACCGGCAGCG ATTGCCGGAC TGTTTAGCCC AACGCCACCA CCTACCGGTG AGCCGCTGGG TCCGGTCGGA ATCGCCCGTG CGACCGGTGA AGTGATTCGC CAGCCCGACG GTTTCATCTC ATTCTGGTCG CTCACGGCAG TGTTAAGCCT GAACCTGTTT ATCCTCAATT TGCTACCTAT CCCGGCGCTC GACGGTAGCC ATATTATGTT CGCATTGATT GAATGGGTGC GAGGGAAGAA GCTACCACCT GAAAAAGAAG CGCTGGTGCA TACGTTTGGC TTTATGGCGT TGATGGGTCT GATGTTGCTC TTGACGGTAA ACGACGTGAT CAATGCCGTA CAAGGCACAC CGATCTTTGG ACGCTGA
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Protein sequence | MLATTLNSLW QQLISGIFDP LVTILVFLIM LSLLVFVHEL GHLWVGLRMG IKVEEFGIGF PPRALVLFER NGIKYTLNWL PLGGFVRFAG MDGEKDAVYG SGSLATAPPW RKIPVMLAGP LMNFILAVVI FAVLFATTGI PTPTGRMEIG NVFPNTPAAM AGFQPGDELV SLDGQPVTSE QVIRDVARKR LGSTIEAVVV RNGSELTLNV TPGPWTAPDG REFSAGFGFS YGPQVVNQPI HPLAAVGAGL MHSFELTGRM VMMLADLPAA IAGLFSPTPP PTGEPLGPVG IARATGEVIR QPDGFISFWS LTAVLSLNLF ILNLLPIPAL DGSHIMFALI EWVRGKKLPP EKEALVHTFG FMALMGLMLL LTVNDVINAV QGTPIFGR
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