Gene Cagg_0529 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_0529 
Symbol 
ID7267026 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp648368 
End bp649093 
Gene Length726 bp 
Protein Length241 aa 
Translation table11 
GC content55% 
IMG OID643565392 
Productundecaprenyl diphosphate synthase 
Protein accessionYP_002461904 
Protein GI219847471 
COG category[I] Lipid transport and metabolism 
COG ID[COG0020] Undecaprenyl pyrophosphate synthase 
TIGRFAM ID[TIGR00055] undecaprenyl diphosphate synthase 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTCAGG ATGGTGTACC GTCCGGCACA AAGATTCCGC AACACATCGC GGTGATAATG 
GATGGTAACG GACGCTGGGC CCAACAACGG GGCTTACCAC GACTGGCCGG TCATCGTGCT
GGGACCGAGA ATATTCGTCC AATCGTCACG GAATGCGCAC GGCTCGGAGT GCGTGTATTA
ACCTTGTACG CCTTTTCAAC CGAGAACTGG AACCGGCCAT CGGTGGAAGT ACAGGGGTTA
ATGCAGATTC TAAGCGAATT TATCGACCGC GAAATCCGGA ATCTGCATGC CCAGAATGTG
CATCTGCGAC ACCTTGGCCG GCTCGACGGT CTCAGCCCCC ATTTGCGCGA AAAGGTAAAA
TACGCGATTG ATCTGACCCG TAACAATACT GGGCTGATTT TGGCGATTGC CTTCAACTAC
GGCGGAAGAG CCGATATTGT CGATGCAGTG CGTGCCATTG TCGCCAGTGG TATTCCCGCC
GATCAAATTA CCGACGAGGT GATAAGTGCG CACCTGTCAA CCCATGGCCT ACCCGACCCG
GATATGATCA TCCGTACCAG TGGCGAGCGG CGCCTCTCGA ATTTCTTAAT CTGGCAGTCG
GCTTACAGCG AATACTGGTT TACGCCGGTG TTCTGGCCCG ATTTTCGGCC CGAACATCTG
CATCAGGCAA TTCTTGACTA TGGACGGCGC GAACGCCGCT TCGGCGGGCT CCCCGAGTCG
AGCTAA
 
Protein sequence
MSQDGVPSGT KIPQHIAVIM DGNGRWAQQR GLPRLAGHRA GTENIRPIVT ECARLGVRVL 
TLYAFSTENW NRPSVEVQGL MQILSEFIDR EIRNLHAQNV HLRHLGRLDG LSPHLREKVK
YAIDLTRNNT GLILAIAFNY GGRADIVDAV RAIVASGIPA DQITDEVISA HLSTHGLPDP
DMIIRTSGER RLSNFLIWQS AYSEYWFTPV FWPDFRPEHL HQAILDYGRR ERRFGGLPES
S