Gene Cagg_0526 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_0526 
Symbol 
ID7267023 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp646448 
End bp646981 
Gene Length534 bp 
Protein Length177 aa 
Translation table11 
GC content54% 
IMG OID643565389 
ProductTranslation elongation factor EFTs/EF1B dimerisation 
Protein accessionYP_002461901 
Protein GI219847468 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0264] Translation elongation factor Ts 
TIGRFAM ID[TIGR00116] translation elongation factor Ts 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00005849 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGTGG CGGTACCAAT CGAATTAGTT AAGGAACTAC GCGAACGCAC CGGAGCCGGC 
ATCAAAGAGT GCCGGGATAT TCTCGAGCAG ACCGGTGGTG ACATCAACAA GGCTATCGAG
ATTTTACGGG AGCGTGGGAT TGAGGCAGCA GCCAAGAAGG CCTCGCGCGA AGCCAACGAA
GGTCTCATTG GCGTATATGT CCACTACGGT TCACGAATTG CCGCAATGGT TGAGCTGAGC
TGTGAGACCG ACTTCGTCGC GCGCACGGCC GAGTTCAGCC AGTTGGCGAA CGATCTAGCC
CAACATATCG TTGCGCTCAA CCCGCGCTTT ATTAGCGTCA ACGAAGTCAC CGACGAGATG
ATCGCCGAGA GCGGCCAATC GCGTCAAGCG TTCATCGAAG AGACGGTGCT GCTCGAGCAG
AAGTTTATTA AGGACCCGGC CCGCACTATC GAAGAGAAGA TCAAAGAGGC TATCGCCAAA
TTGGGTGAAA ACATCGTTGT CCGGCGTTTT GTTCGCTACG AAGTTGGCGC ATAA
 
Protein sequence
MTVAVPIELV KELRERTGAG IKECRDILEQ TGGDINKAIE ILRERGIEAA AKKASREANE 
GLIGVYVHYG SRIAAMVELS CETDFVARTA EFSQLANDLA QHIVALNPRF ISVNEVTDEM
IAESGQSRQA FIEETVLLEQ KFIKDPARTI EEKIKEAIAK LGENIVVRRF VRYEVGA