Gene Cagg_0513 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_0513 
Symbol 
ID7267010 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp634356 
End bp635165 
Gene Length810 bp 
Protein Length269 aa 
Translation table11 
GC content56% 
IMG OID643565376 
Productextracellular solute-binding protein family 3 
Protein accessionYP_002461888 
Protein GI219847455 
COG category[E] Amino acid transport and metabolism
[T] Signal transduction mechanisms 
COG ID[COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.483175 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATACCG GTCAATGGCA ACGCTGGCTT GATGGGTTCG CGATTGTGGT GCTGCTTGCT 
TACGCTTGGC TTGCGTGGAA TGTGAATCAG GCCGTGACGC CGATCGATCC GGTGTATGCC
GATATTCGCG CGCGCGGTGT CCTGCGTGTT GCCGTCGATG TCGGCTATCG CCCATTTGCC
GAAGAGCGTG CCGGCGAATT GGTAGGGTTT GATATCGACT TAGGGCGTGC AATCGGACGT
GAGCTTGGGG TCGATGTGGT TTTTATCCGT AGTGGTTTCG ATGCGCTGTA CGATCAACTA
ACCGGTCAAC AAGCCGATCT GATCGCAGCA GCGTTACCGT ATGCTCCTGA ACAGGGCTAT
CGTGCCCGCT TTTCGCGTCC CTATTTCGAT GGCGGGTTGA TGTTAGTGAC GCCGGTCGAC
AGCACGATCG GTCAGCTTGC CGATCTGCAA GATCGACGTT TGGGAGTTGT ATTGGGCAGC
GAAGGTGACT CATTAGCCCG CCGTTTTGCA TTGCAGACAC CGGTGACACT TGTTGAAACC
GATGAGATTG CGCCATTGGT GCAAGGGTTG CGTACCGGTA CGATTGATGC TGCCATTCTC
GATCATGTGG CGGCGTTGGG AGCAATAGCT GCCGGCGATC TGCGGATCGC GGCTGCATTG
AGCTACGAAC CGTATGTGTT AGCGATGCCG GCGGCGGCGT TTCAACTTGA GTCTGAAATC
AACCGGGTGT TGGCCCGCTT GGAAGAACGC GGTGAGCTAC AAGTATTGCA GCAGCGGTGG
ATGGGTAGTC ATGAGCCGGT TCGTGAATAG
 
Protein sequence
MNTGQWQRWL DGFAIVVLLA YAWLAWNVNQ AVTPIDPVYA DIRARGVLRV AVDVGYRPFA 
EERAGELVGF DIDLGRAIGR ELGVDVVFIR SGFDALYDQL TGQQADLIAA ALPYAPEQGY
RARFSRPYFD GGLMLVTPVD STIGQLADLQ DRRLGVVLGS EGDSLARRFA LQTPVTLVET
DEIAPLVQGL RTGTIDAAIL DHVAALGAIA AGDLRIAAAL SYEPYVLAMP AAAFQLESEI
NRVLARLEER GELQVLQQRW MGSHEPVRE