| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cagg_0508 |
|---|
| Symbol | |
|---|
| ID | 7267005 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chloroflexus aggregans DSM 9485 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011831 |
|---|
| Strand | - |
|---|
| Start bp | 624876 |
|---|
| End bp | 625349 |
|---|
| Gene Length | 474 bp |
|---|
| Protein Length | 157 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 643565371 |
|---|
| Product | NUDIX hydrolase |
|---|
| Protein accession | YP_002461883 |
|---|
| Protein GI | 219847450 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG1051] ADP-ribose pyrophosphatase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.0799439 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 0.00145151 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGACCGTCA AATATACGCG CTGGCTACGG AGCTACGTCG GCCACCAACG AATTTTACAG
GTACGGGCGA GTGGCTTTGT TCGTGATGAA ACGGGCCGTA TCTTGTTGTG CCGGCGGGCC
GATGTGATGT TGTGGGATGT GCCGGGTGGG ACGATTAGCC TCGATGAATC ACCGGCACGG
GCTTTAGTTC GCGAAGTACA GGAAGAGACC GGTCTGATTT TAGAGCCATT TAAGTTGATC
GGTATCTACA GCGGTCCCGA TTTCGCATGG AGCTATCCCA ACGGTGACCA ATCACAGATT
TTAGCCATCT TTTTTGCAGC GCGGATCGTC GGTGGTGAAT TGCAACAAGC CGGTCACGAG
AACGTTAACG TTGGCTTTTT TGCGCCCGAC CATCTACCAC CATTACTCAA CCGCACACGC
CGGATGTTGG TCGATGCCTT CGCCGACCGG CCTGAAGCTA CGTTTGACCG GTGA
|
|---|
| Protein sequence | MTVKYTRWLR SYVGHQRILQ VRASGFVRDE TGRILLCRRA DVMLWDVPGG TISLDESPAR
ALVREVQEET GLILEPFKLI GIYSGPDFAW SYPNGDQSQI LAIFFAARIV GGELQQAGHE
NVNVGFFAPD HLPPLLNRTR RMLVDAFADR PEATFDR
|
|---|
| |