| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cagg_0479 |
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| Symbol | |
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| ID | 7266647 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chloroflexus aggregans DSM 9485 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011831 |
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| Strand | + |
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| Start bp | 588650 |
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| End bp | 589765 |
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| Gene Length | 1116 bp |
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| Protein Length | 371 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 643565342 |
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| Product | hydrogenase expression/formation protein HypD |
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| Protein accession | YP_002461856 |
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| Protein GI | 219847423 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0409] Hydrogenase maturation factor |
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| TIGRFAM ID | [TIGR00075] hydrogenase expression/formation protein HypD |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0595509 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.140537 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAATATC TTGACGAATT TCGTGACCCA GCGCTGGCCC GCCGCCTCTT CGAGCAAATC
CGACGCATCA CCACACGTCA CTGGGCAATT ATGGAAGTCT GCGGCGGCCA GACCCATTCG
ATCATTCGCA ACGGAATCGA TCAGTTACTG CCACCCGAGA TCGAGCTTAT CCACGGCCCC
GGCTGCCCAG TCTGCGTTAC TCCACTCGAA ATCATCGACA AGGCGCTGGC CATTGCCGCC
CTCCCCGAAG TGATCTTCTG CTCATTTGGC GACATGCTGC GCGTGCCAGG TAGCCGCAAA
GACCTCTTCC GCGTCAAGAG CGAAGGTGGT GACGTGCGCG TCGTCTATTC CCCGCTCGAC
GCAGTAAAGC TGGCCCAACA ACACCCCGAC CGCCAAGTCG TCTTTTTTGC CATCGGCTTC
GAGACTACTG CACCCGCCAA CGCCATGGCG GTCTATCAGG CAGCCAGACT CGGCCTCAAG
AACTTTTCGA TGTTGGTCTC ACACGTCCTG GTACCACCGG CAATCAGTGC GATTATGGAG
TCGCCGAACA ACCGCGTCCA AGGCTTTCTA GCCGCTGGTC ATGTCTGCAG CGTCATGGGC
ATCGAAGAAT ATCGCTCGCT CGTCGAAACA TATCGTGTCC CCATTGTGGT TACCGGTTTT
GAGCCACTCG ACGTACTCGA AGGCATTCGT CGCGCCATTC TCCAACTCGA GCAAGGCCGT
GCCGAACTAG ACAACGCCTA CGAACGCGCC GTTCGCCCGG AAGGCAACGT CGCCGCCAAA
CAAATGCTTG CCGATGTCTT CACCGTCACC GACCGCACTT GGCGTGGAAT TGGGCGCATC
CCGCGCAGCG GTTGGCGGCT CAGTGACCGC TACGCCGAAT TCGATGCCGA ATTCCGATTC
AACGTCCACG ACATCCAAAC GAGCGAGTCG CCGCTATGTC GGAGTGGTGA AGTGCTGCAA
GGATTGCTCA AACCAAACCA ATGCCCGGCC TTCGGTAAAG AATGCACACC GCGGACGCCA
CTTGGCGCAA CGATGGTATC AAGCGAGGGA GCATGCGCAG CGTATTATCA GTATGGCCGA
TTCGTGCCAA CCAGCACGAT TGGTGTAGCA TCGTAA
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| Protein sequence | MKYLDEFRDP ALARRLFEQI RRITTRHWAI MEVCGGQTHS IIRNGIDQLL PPEIELIHGP
GCPVCVTPLE IIDKALAIAA LPEVIFCSFG DMLRVPGSRK DLFRVKSEGG DVRVVYSPLD
AVKLAQQHPD RQVVFFAIGF ETTAPANAMA VYQAARLGLK NFSMLVSHVL VPPAISAIME
SPNNRVQGFL AAGHVCSVMG IEEYRSLVET YRVPIVVTGF EPLDVLEGIR RAILQLEQGR
AELDNAYERA VRPEGNVAAK QMLADVFTVT DRTWRGIGRI PRSGWRLSDR YAEFDAEFRF
NVHDIQTSES PLCRSGEVLQ GLLKPNQCPA FGKECTPRTP LGATMVSSEG ACAAYYQYGR
FVPTSTIGVA S
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