Gene Cagg_0460 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_0460 
Symbol 
ID7266628 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp566664 
End bp567269 
Gene Length606 bp 
Protein Length201 aa 
Translation table11 
GC content51% 
IMG OID643565323 
Productbeta-lactamase domain protein 
Protein accessionYP_002461837 
Protein GI219847404 
COG category[R] General function prediction only 
COG ID[COG0491] Zn-dependent hydrolases, including glyoxylases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.516875 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00433941 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGATAACG TACCAGCCCT AACTATTGTC AACGTTGGTT ACCGCTCAAC CAATTACTGG 
GTTATCAGTG CAGGTAATTC TCGTTTGCTT GTTGACATCG GTTGGCCAGG AACCCTCGGT
ATCATGAAGG CAAATCTCAA GAAGATGGGA ATACCCCTCC GTGAAATTCG TTACGCGCTT
GCCACGCACT ATCATATCGA CCATGCGGGA CTTGCCGAGG AATTAAAGCA AGAAGGTGTT
CATCTCCTCG TGCTCGATGT GCAGGTGGAC GCTATCCCGA TCATGAAAAC CTGGACGAAG
CCGGCCGACA ACTACGTTGA CATTACGCAG CATGGCAACG TCGTCATCTC ATTCGAACAA
AGTCGTCAGA TCCTTGGTCA GATTGGGATT GCTGGAGAAA TCCTGCATAC ACCTGGTCAC
ACTGAACATT GCGTCTCGCT TCTCCTCGAC GATGGTTCAG TTTTCACGGG GGATCTTCCG
CCAGAAGCCT ATGCCTATGA CAATCCTGTC GCTCTGGCGA GTTGGAGCCT CCTTCGAGAA
AAGGGCGCTA TCCGTGTGTA TCCTGCCCAT GGCCCGATAA GGTTACTCGA CGAAATTCGA
CGATGA
 
Protein sequence
MDNVPALTIV NVGYRSTNYW VISAGNSRLL VDIGWPGTLG IMKANLKKMG IPLREIRYAL 
ATHYHIDHAG LAEELKQEGV HLLVLDVQVD AIPIMKTWTK PADNYVDITQ HGNVVISFEQ
SRQILGQIGI AGEILHTPGH TEHCVSLLLD DGSVFTGDLP PEAYAYDNPV ALASWSLLRE
KGAIRVYPAH GPIRLLDEIR R