Gene Cagg_0440 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_0440 
Symbol 
ID7266608 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp546372 
End bp547193 
Gene Length822 bp 
Protein Length273 aa 
Translation table11 
GC content62% 
IMG OID643565306 
Productbiotin/lipoate A/B protein ligase 
Protein accessionYP_002461820 
Protein GI219847387 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0095] Lipoate-protein ligase A 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.491162 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGAGGAA TGACGTCGTG GCGACTACTA CCGCCGGCGC AGGGCGATCC GGCCAGCGAG 
TTGGCTGCCG GCGCGGCGAT GCTGGCCGGC CTGGCGACCA CGCCCCAACC GGCGATTCGC
TGGTATGCCG CTGCGCCCCA GCCGGCGTTG GTGATCGGTT CGGGCCAGAA GGTGTGCGAG
GTTGATCAGG CGGCCTTGGC GAATGCCGGC ATCACGCTGC ATCGGCGAGC CAGCGGCGGT
ACGGCCGTGC TCTTCGTGCC CGGCTTCTTG ATGCAAGACA TTGTGCTGCC GGCAGATCAT
CCGCTGGCCC ATCCTGATGT TAGCGAGTCG TACCGCTGGC TGGGTGAAGT GTGGCAAGCG
ACGTTGGCTC ACTTTGGCGT GCAGGCCGAT CTGATAACCA TTGCGGCAGC GCGCGCTGAC
CGGGCATCGC TCGATCCGCT GGTAGCGCGG GCATGTTTTG GTGGTTGGTC GCCCTACGAA
TTGCTCGTTG CCGGGCGTAA ATTGGTTGGA TTTGCCCAGA TTCGTCGGCG CGAAGGTCTT
TTGTTTCAGG TTGGGGTGTA TACCCATTGG CCGGGAGCGC AATTGGCTGA CCTACTGAAC
ATTGCCGCAT CGGAACGTCA ATTGCTGATT GACCGGTTAT CAGCTCGCGT GACCGATCTG
GCCGCTGTCT GTGTCAAACC GCCCGATTTG GCTGCATTGG CAACCGCATT TGCCACGGTA
CTTCATCAGC GGTACGATGT AACCATCACG CCTTCCGATT GGACGGCGGC GGAATTGGTG
GCGATGGCGG CGGCGCAGAA CCGGTTTGCG CCCTTGGGAT GA
 
Protein sequence
MGGMTSWRLL PPAQGDPASE LAAGAAMLAG LATTPQPAIR WYAAAPQPAL VIGSGQKVCE 
VDQAALANAG ITLHRRASGG TAVLFVPGFL MQDIVLPADH PLAHPDVSES YRWLGEVWQA
TLAHFGVQAD LITIAAARAD RASLDPLVAR ACFGGWSPYE LLVAGRKLVG FAQIRRREGL
LFQVGVYTHW PGAQLADLLN IAASERQLLI DRLSARVTDL AAVCVKPPDL AALATAFATV
LHQRYDVTIT PSDWTAAELV AMAAAQNRFA PLG