| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cagg_0434 |
|---|
| Symbol | |
|---|
| ID | 7266602 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chloroflexus aggregans DSM 9485 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011831 |
|---|
| Strand | - |
|---|
| Start bp | 538220 |
|---|
| End bp | 539398 |
|---|
| Gene Length | 1179 bp |
|---|
| Protein Length | 392 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 643565301 |
|---|
| Product | DNA replication and repair protein RecF |
|---|
| Protein accession | YP_002461815 |
|---|
| Protein GI | 219847382 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG1195] Recombinational DNA repair ATPase (RecF pathway) |
|---|
| TIGRFAM ID | [TIGR00611] recF protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.626531 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTACATTC ATCACCTTGC TTTGCGCGAT TTTCGTAACT ACCGGCGGCA AGATGTGGCC
CTCTCGCCGA CAACGATCCT CTTGTACGGC CCGAATGCTG CCGGTAAGAC GAGCCTCCTT
GAGGCTATTT TTTATCTCGC CACTACGCGC TCGCCTCGCC TCAGCAGCGA TCGCGACCTC
GTGCGCTGGG ATGCAGTCGG TGAAGCCGGC GCGCCACCTT TTGCCCGCAT TGCAGCCGAT
GTTGAGCGTC GGATCGGACC GGTACGGCTT GAGATACTGG TACAGCGCCG GCTCGATGAT
GGTGGTCAGC CGCTAAACGG CGCGCAAAAA TTGGTGCGGA TCGATAAGCG CCCGGCGCGC
GCGATTGATC TGATCGGTCA GTTGCGGGTA GTGCTCTTTA CCCCTACCGA TGTCATGCTG
GTTGATGGCC CCCCTGCCGA ACGGCGGCGC TACCTCGACA TTACCCTCTC ACAGCTCGAT
CCGCACTACG TGCGAACCCT GGCGTATTAC CAGAAGATTC TGTTGCAACG CAATAGTCTC
TTGCGCGCAT GGCGTGAACA ACGTCGCTTG CCCCGCAATG TTGATGCCGA GTTAGGGTAT
TGGGATCAAG AGCTGGCCGC TGCCGGAGGA TATTTGTTGG CCGAACGGTT GCGGGCCGTT
GTCGAATTGA GCGCGCTGGC CGGGTCCATT TACCGAAAGA TTAGCGGTGG CGAACACGAA
TTGCAGATTG AATATATCGC CAGTTGTGAC CTCGACGCAG CGCGCGATGC CGGTAGTCTA
GCCGAGCGAC TACGTTTAGC GTTTGCCGCT CAGCGTACCG ATGAGCTGGC CCGTGGGCAG
ACACTCTGCG GACCACACCG TGATGATCTG GTTTTTAACG TTGCCGGTGT GAATCTTGGT
CGGTATGGTT CGCGTGGTCA ACAACGTACC ATTGCCCTTG CGCTCAAGAT CGGTGAAGCC
GAACTGATGC AGCAACGCGG TGGTGATGCA CCGGTGCTCT TACTCGATGA TGTTTTGAGC
GAACTCGACA ACCGACGTCG CATGCATTTG CTTGACCTTA TTCTGCGCCC GCAACAGCAG
ACACTGCTCA CGGCCACCAA TCTGAGCGAC TTTAGTGCTG ATTTTCTCGC TGCCGCCCGT
CGCTTTCGGG TCGAAGATGG TCAGCTTTTT GCCGGTTGA
|
|---|
| Protein sequence | MYIHHLALRD FRNYRRQDVA LSPTTILLYG PNAAGKTSLL EAIFYLATTR SPRLSSDRDL
VRWDAVGEAG APPFARIAAD VERRIGPVRL EILVQRRLDD GGQPLNGAQK LVRIDKRPAR
AIDLIGQLRV VLFTPTDVML VDGPPAERRR YLDITLSQLD PHYVRTLAYY QKILLQRNSL
LRAWREQRRL PRNVDAELGY WDQELAAAGG YLLAERLRAV VELSALAGSI YRKISGGEHE
LQIEYIASCD LDAARDAGSL AERLRLAFAA QRTDELARGQ TLCGPHRDDL VFNVAGVNLG
RYGSRGQQRT IALALKIGEA ELMQQRGGDA PVLLLDDVLS ELDNRRRMHL LDLILRPQQQ
TLLTATNLSD FSADFLAAAR RFRVEDGQLF AG
|
|---|
| |