Gene Cagg_0427 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_0427 
Symbol 
ID7266595 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp528956 
End bp529564 
Gene Length609 bp 
Protein Length202 aa 
Translation table11 
GC content55% 
IMG OID643565294 
ProductLysine exporter protein (LYSE/YGGA) 
Protein accessionYP_002461808 
Protein GI219847375 
COG category[R] General function prediction only 
COG ID[COG1279] Lysine efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.534034 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTAGAGT TCTACCTACG CGGTGTCTTG TTTGGCCTGG CGATTGCCGC TCCGGTTGGC 
CCGATAGGGG TGCTTTGTAT CAGACGGACT ATCGCCGATG GTCAAGTGGC CGGTTTCATG
AGCGGATTAG GTGCAGCAAC GGCTGATGCT CTCTATGGCT TGATTGCCGC GCTTGGGTTA
CAAGCGCTGA GCACGCTGCT ACTCGGTATT AGTCCGGTTT TACGTTTCAT CGGAGGGGTG
GTGTTGGTCT GGCTCGGTTT GACCACCCTC CTGGCGCGTC CACAGCCGGT ACTCGAACGA
CCGGAGCCAA CTCGGCGTGA TTTGGTCGGA ACATACCTAT CCACGCTCTT CCTAACCTTA
ACCAATCCGG CGACTATCGT CATTTTTACA GTGATCTTTG CCGGTCTTGG TTTGAGTACC
GGTGCAGGTA TGTGGGAAGG TGTGGTGCTC GTGTGCGGTG TTGTGAGCGG TTCAGCCCTT
TGGTGGACGC TCCTGAGCGG TAGTGTAGCG TTAGTTCGCG GTCGGGTGAC AACTCCGATG
TTGCGTATCG TGAATATTGT ATCCGGCGTC ATTATTGCCG GATTTGGTAT AGCTGCGCTG
GTAATGTAA
 
Protein sequence
MLEFYLRGVL FGLAIAAPVG PIGVLCIRRT IADGQVAGFM SGLGAATADA LYGLIAALGL 
QALSTLLLGI SPVLRFIGGV VLVWLGLTTL LARPQPVLER PEPTRRDLVG TYLSTLFLTL
TNPATIVIFT VIFAGLGLST GAGMWEGVVL VCGVVSGSAL WWTLLSGSVA LVRGRVTTPM
LRIVNIVSGV IIAGFGIAAL VM