Gene Cagg_0425 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_0425 
Symbol 
ID7266593 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp527076 
End bp528248 
Gene Length1173 bp 
Protein Length390 aa 
Translation table11 
GC content57% 
IMG OID643565292 
Producttyrosyl-tRNA synthetase 
Protein accessionYP_002461806 
Protein GI219847373 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0162] Tyrosyl-tRNA synthetase 
TIGRFAM ID[TIGR00234] tyrosyl-tRNA synthetase 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATCTGT CCGAGCTATT AAGTCGCGGC GTTGCCGAGG TGATTGTTGA AAGTGAATTA 
CGCGCGCGTC TCCAAAGTGG CACGCCGCTT CGCCTGAAAC AAGGGTTTGA TCCGACAAAG
CCCGACATGC ATATCGGGCA CGCCGTAGGG CTGCGTAAGC TACGCGCCTT CCAAGAACTG
GGCCATCAGG TGGTGTTGAT CGTCGGTGAC TGGACGGCGC AGATCGGCGA TCCGAGCGGT
CGCGACGAGA CGCGCGCCCG CTTGTCGGCG GCTGAAGTGC GCGCCAACGC CGAGACCTAC
ATGGAGCAAT TTTTCCGGGT GGTTGACCGC CAACGAACCG AGGTACGCTG GCAGAGTGAA
TGGTTTGGTC AGTTTACCCT GGAAAACGCG CTCGATTTGG CCGGACGCTT TACGCTGGCC
CAGATGCTGG CGCACGAGAC CTTCCGCAAA CGTTATGAGA CCGGCGCACC GCTGACCATC
CTTGAATTGA TGTATCCGAT GCTGCAAGCG TATGACTCGG TCGCGATTAG GGCTGATGTT
GAGTTTGGTG GTACGGACCA GAAGTTTAAT ATTCTCGCCG GACGAGAGCT GATGGCGCAG
TTGGGAATGA CGCCGCAGCA AGTCTTCCTG GTACCGCTCA TTCCCGGCAC CGACGGGCGT
AAGATGTCGA AGACGTTTAA CAATACGGTC GATATTCGTA TGCCGCCCAC CGAAATGTAC
GGACGTATTA TGTCAATGAG TGACGAGGTA CTGCCACTCT ATTTTGAAGT ACTAACCGAT
GTACCGATGG CCGAGATTGC CGAGATGAAG ACGGCAATGG CTACCGGCCA AGTCAATCCC
CGCGATCTGA AGATGCGATT GGCGCGTGAG ATCGTCGCCC AATTCCACGA TCCGGCGGCG
GCGGCAGCGG CAGAAGCGAC CTTTATTCGC CAGTTTGTCG AGCGTGAATT GCCGGAAGAT
ATTCCGAACT TTACCCTTGA AGCACCCACC GGAATCGTGG ATGTGTTAGT TGCCAGCGGC
CTTGCGCCGA GCAAAAGTGA GGCGCGTCGC TTGATCGATG GCGGCGGCGT GCGCGTTGAT
GGCGAGCGCG TGGAAGGTTA CACGCTTACG ATCAATCCCG GTGCGAATGT GGTGGTGCAG
GTTGGTCGGC GCAAGTTTGT GCGTGTCGTG TAG
 
Protein sequence
MDLSELLSRG VAEVIVESEL RARLQSGTPL RLKQGFDPTK PDMHIGHAVG LRKLRAFQEL 
GHQVVLIVGD WTAQIGDPSG RDETRARLSA AEVRANAETY MEQFFRVVDR QRTEVRWQSE
WFGQFTLENA LDLAGRFTLA QMLAHETFRK RYETGAPLTI LELMYPMLQA YDSVAIRADV
EFGGTDQKFN ILAGRELMAQ LGMTPQQVFL VPLIPGTDGR KMSKTFNNTV DIRMPPTEMY
GRIMSMSDEV LPLYFEVLTD VPMAEIAEMK TAMATGQVNP RDLKMRLARE IVAQFHDPAA
AAAAEATFIR QFVERELPED IPNFTLEAPT GIVDVLVASG LAPSKSEARR LIDGGGVRVD
GERVEGYTLT INPGANVVVQ VGRRKFVRVV