Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cagg_0423 |
Symbol | |
ID | 7266591 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chloroflexus aggregans DSM 9485 |
Kingdom | Bacteria |
Replicon accession | NC_011831 |
Strand | - |
Start bp | 523780 |
End bp | 525432 |
Gene Length | 1653 bp |
Protein Length | 550 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 643565290 |
Product | DEAD/DEAH box helicase domain protein |
Protein accession | YP_002461804 |
Protein GI | 219847371 |
COG category | [J] Translation, ribosomal structure and biogenesis [K] Transcription [L] Replication, recombination and repair |
COG ID | [COG0513] Superfamily II DNA and RNA helicases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.109819 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACGACGT TTGCTGCGTT GGGCCTGAGC GATGCACTTC TGCATACCTT GCGTGAGCTT GGCTACGACG AACCAACTCC CATTCAGGCG CAAGCCATTC CTTTGTTACT TGCCGGTCGC GATGTGATCG CTCAGGCCCA GACCGGCACC GGGAAGACGG CGGCGTTTGC GCTGCCGATG ATTGAACAAG TGACCGATGA ACCGGTCGTA CAGGCGCTCG TTTTGGCGCC AACTCGTGAG CTGGCAGTCC AAGTGGCCGA GGCTGTCCAT CGTTATGGCC GCCATCGCGC ACTCCGGGTG TTGCCGATCT ACGGCGGTCA GCCGATTGAG CGGCAGTTGC GTGGCTTAGC TCAGGGTGTA CAAGTTGTCG TTGGGACGCC GGGACGGGTG CTCGATCACT TACGCCGGGG GACGTTGCGC TTCGACCATC TACGCCTGGT TGTGCTCGAT GAAGCCGACG AAATGCTCGA TATGGGTTTT GCCGAGGAGC TTGAGGCTAT TCTGCAATTG ACCCCGGCCG AACGCCAGAC GGCTCTGTTC TCGGCGACGC TGCCGCCCGC TGTGCAGAGT CTGACCCTGC GCTATACCCG CCAACCGGTC CGGGTGAGTA TTGCTGCCGA ACAATTGACC ACTCCGCATA TCCGTCAGAT TTATTACGAG ATCTTGGCTC GTGATAAACT CGATGCGCTC TGCCGCGTGC TCGACGCCGA GATGCCGCAA CTGGCGATTG TTTTTTGCCG GACCCGCCAA GAGGTTGATG AAATCGGTGA ACGGCTGCAA GGGCGTGGCT ATGCTGCCGA GTCGCTCCAC GGCGATTTGA GCCAGGCGGT GCGCGATCGC GTCATGCGGC GCTTCCGCGA GGGGCAACTC GATGTGTTGG TGGCAACCGA TGTAGCGGCA CGTGGTCTCG ATATTGCCGA AGTGAGCCAC GTGATTAACT ACGATGTCCC GACCGATCCT GAAAGCTATG TTCACCGGAT CGGTCGTACC GGGCGTGCCG GGCGTGCTGG GGTCGCGATC ACGTTCATTA CTCCCCGTGA ACGCCGGATG CTTCAAACCA TTGAACGGGT GACGCGCACG CGGATCGAGC GTTGCCAGAT GCCCACTTTA GCCGATGTCG CTGCTCGTCG CCGCCTAGCA TTGCGCGATC AGTTGCGTGA GGCAATGCAG GCCCCCGGCC TCACGAGTTA TATGGATCTG CTTGACGAGT TGACCGTTGA ACACGATCTG CGCACGTTGG CTGCTGCGGC GCTCAAGCTC TTACTCAACG AGACGGAAAC TGAGCAGGTA GATACGATTA CTCGCCTCGA ACCTCCCCGC TCCGAACAGG TTGAACGTGG TGAGCGCTCA TCACGTGCCA GGCGTGCGGC TGTTGATGAA CGACCTACCC GTCGCGAAAG CGGTATGGCT CGCATCCGGC TTAATCTCGG TCGAAACGAT CAGATTCGGC CTGCCGATAT TGTTGGTGCG ATTGCCAATG AAGCCGGTTT GTCTGGGCGG AGTATTGGTG CTATCGAGGT TCAGGCACGG ATGAGCCTTG TTGATGTTCC ACGTCGGTCA GTACGCCAGG TACTGCAAGC TCTTAATCGC ACGACGTTAC GCGGTCAACG GGTGCGGGCG GTGTTAGTCT CAGAAGAAGT GGTTGTAGCA TAA
|
Protein sequence | MTTFAALGLS DALLHTLREL GYDEPTPIQA QAIPLLLAGR DVIAQAQTGT GKTAAFALPM IEQVTDEPVV QALVLAPTRE LAVQVAEAVH RYGRHRALRV LPIYGGQPIE RQLRGLAQGV QVVVGTPGRV LDHLRRGTLR FDHLRLVVLD EADEMLDMGF AEELEAILQL TPAERQTALF SATLPPAVQS LTLRYTRQPV RVSIAAEQLT TPHIRQIYYE ILARDKLDAL CRVLDAEMPQ LAIVFCRTRQ EVDEIGERLQ GRGYAAESLH GDLSQAVRDR VMRRFREGQL DVLVATDVAA RGLDIAEVSH VINYDVPTDP ESYVHRIGRT GRAGRAGVAI TFITPRERRM LQTIERVTRT RIERCQMPTL ADVAARRRLA LRDQLREAMQ APGLTSYMDL LDELTVEHDL RTLAAAALKL LLNETETEQV DTITRLEPPR SEQVERGERS SRARRAAVDE RPTRRESGMA RIRLNLGRND QIRPADIVGA IANEAGLSGR SIGAIEVQAR MSLVDVPRRS VRQVLQALNR TTLRGQRVRA VLVSEEVVVA
|
| |