Gene Cagg_0421 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_0421 
Symbol 
ID7266589 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp521679 
End bp522275 
Gene Length597 bp 
Protein Length198 aa 
Translation table11 
GC content54% 
IMG OID643565288 
Producttranscriptional regulator, TetR family 
Protein accessionYP_002461802 
Protein GI219847369 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCCGAC AACAGCACTC AGATCATATT CGCAATCGAA TCATTGATGA AGCCGCACGA 
CTAATTGTCA CCTACGGCTA TGACGGCATC GCGATGCGTG AGATTGCTGA TGCTGTCGGG
TTGTCGAAGG CCGGGTTGTA CCATCATTTT CGTGATAAGG AAGAGCTGCT GATCGCCGTC
TTGACTAATT GGTCAAACGA GATGGCGGCA TTAGTCGAGA CCGCCGGACG CGAACCAACG
GTACGCGCCC AGCTAACAGC ACTGGTACGC GGCTTGTTTC AGCAAGCACC GGCACAACGC
GCCTTGGTGC GGTTGAGTAA TCAGGATATG CCGCGACTCA GTGAGACGGC GCGTCACAGT
GTAACGCAGT GCTACATCAA CGGATTGATC GGTCCGATTA CGGAGATGAT CACGACCGGT
ATTGAGCGTG GTGAACTACG CCCGGTTGAC CCCAAACTCG CGACATGGCT CTTATTGGGA
TTACTCTATC CCTTCTTCCA TATTGAACAG GCAACGGTCG ACGATAGCAG CACGACGTTG
GCCGACCTGA TCATTACCAC GTTCTTTGAC GGGCTAAGCC AACCTCAAAG CCGGTGA
 
Protein sequence
MRRQQHSDHI RNRIIDEAAR LIVTYGYDGI AMREIADAVG LSKAGLYHHF RDKEELLIAV 
LTNWSNEMAA LVETAGREPT VRAQLTALVR GLFQQAPAQR ALVRLSNQDM PRLSETARHS
VTQCYINGLI GPITEMITTG IERGELRPVD PKLATWLLLG LLYPFFHIEQ ATVDDSSTTL
ADLIITTFFD GLSQPQSR