Gene Cagg_0416 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_0416 
Symbol 
ID7266584 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp515607 
End bp516359 
Gene Length753 bp 
Protein Length250 aa 
Translation table11 
GC content52% 
IMG OID643565283 
Productprotein of unknown function DUF540 
Protein accessionYP_002461797 
Protein GI219847364 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2981] Uncharacterized protein involved in cysteine biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.881692 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGAAGGT TGTTCATCGG GTTTAGCTAT CCTTGGCGTG CCCTTCATCT CCTTATCGGT 
CAACCGCGAT GGTGGCGCTA TATTGCCGTT CCGATCGGTC TGAATCTGCT TGTCGGGGTC
GTGCTCTATA CGACTTTGAT GCTGGCCGGG TTTCACGCTA TCGATACACT TGTCGCCGAT
TGGCCGGATT GGATTGCATG GGTGTTACGT GGTGTATTGG TAGTCGCTCT CTTCATCGGG
TTGGGTTATC TGATGGTGCG TTTTGGTGTT GTGCTCGGTT CGCCTTTTTA CAGTCGGCTT
TCTGAATTAC TCGAAGAACA ACTGCGAGGT GTCACGCTTA CCGCACCCCA AGCGACGCCC
GCTCAGCTCG TTCGTGATCT AGGACGCGCT TTGCTGTTTG AAGTAAAAAA GCTCCTGCTA
ATGGTGACAG TCGGTCTCCT GGCACTGTTG CTCAATGTTC TTCCCGGTAT CGGCTCGGTG
CTGGCTACGA TGATCGGCAT AGCGCTTGGG GTAACGATTG CTTGTCTTGA CTTTTTTGAT
CCACCACTTG AACGGCGAAG ATTAACGTTT CGGGCGAAGC TTGGTTTCAT CCGCCGTTAT
TTGCCGGCCA GTGCCGGATT TGGGTTGATC TGTTTAGGGT TGGTGAGTAT TCCGTTGCTC
AACTTGCTGG CCGTGCCAAT CTGTATTACT GCCGGCACGC TCTTTTACTG CGATGTGGCT
ACCACCGAAT CGGCAACCTC AGAGCATGAC TAA
 
Protein sequence
MRRLFIGFSY PWRALHLLIG QPRWWRYIAV PIGLNLLVGV VLYTTLMLAG FHAIDTLVAD 
WPDWIAWVLR GVLVVALFIG LGYLMVRFGV VLGSPFYSRL SELLEEQLRG VTLTAPQATP
AQLVRDLGRA LLFEVKKLLL MVTVGLLALL LNVLPGIGSV LATMIGIALG VTIACLDFFD
PPLERRRLTF RAKLGFIRRY LPASAGFGLI CLGLVSIPLL NLLAVPICIT AGTLFYCDVA
TTESATSEHD