Gene Cagg_0408 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_0408 
Symbol 
ID7266576 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp503962 
End bp506637 
Gene Length2676 bp 
Protein Length891 aa 
Translation table11 
GC content56% 
IMG OID643565275 
Producthypothetical protein 
Protein accessionYP_002461789 
Protein GI219847356 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2723] Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00193386 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTTATA TCCGTCATCT CGGCCTATGG ATCGTTCTTG TTGTGCTCTG CTTGAACACT 
TGGTCGTCGC CGGTGCCGAT GGTGCAATCG GCCAGTCCTT CCGTATTTGG GGCCAACACC
CATATTGCGG CCAGTTATCC GTTTCCCGAC TCGCTGAATC GGCCCGCCAA CGTGATTGCC
CAAAGTGGAA TGGGTTGGGT CCGTGAGGAA TTTCAGTGGG GCCGCATCGA ACCTCGTCCC
GGTCAATTTG ATTGGACATT TACCGATCGG GCGGTCAATG AGTTAGTAAA GCGTGGCATT
ACGATCGTGG GGTTGCTCAA CCCGGCAGTC GGTTGGGGTA CGCCTGATCC GGCGGACGAT
TATATTCCAC CAGAGCAAGG AAGCTTCTAC CCGCCTGATC CACAACTTTT CGCCAACTTT
GCCGCGACCG TCGTCAATCG CTATAAAGAT CGTGTGCGCT ATTGGCAGGT CTGGAATGAA
CCGGACAACC CGGTCTACTG GCGACCATCT CCTAATCCGG CAGCGTATGC GGCCCTGTTG
CGTGCAGTCT ATCCGGCGAT CAAAGGTGCT GATCCGGGCG CGACAGTGCT GGCAGCCGGG
ATTGTTTCAC CTGAACCGGC CGGTTCATTC CTGCAAGCCA TTGCCGATAA TGGCGCATGG
GGGTCGTTTG ATGTTATCGC ACTTCATCCA TACACCGATC CGCTTGGCCC TGAAGCCGGA
TCGATTGATA CGGTTGGAAT CGGTGCGATT CAGACGCTGG CCGCGCGGCT TGGCCCTAAA
CCGATCTGGG TTACCGAGTT CGGCTGGGCC GATAGTCCGA CCGACCGCAC CGGCGAACAG
AGTATAGACC CGGAAACACA GGCCAATTAT CTGATTCGGG CGATGGCAAT GCTGCGCCAG
GCCGGTGTCG AGCGGGTAAT CATGTACCGC TTCAAAGATA TGCAACTGCG GAACGGTGTC
CCGTACAACG CCTACGGTCT GTTGCGCTAC GGCAGTGGTC AAGCCGATTA TAGTCAGTTC
AAACCGGCTT TTAATGCCTT CCGCACGCTG AACCAACAGG TAGGTGGTCG GCAGCCGCTT
GGCTTACGAC GATTGAGTGA CGAGCGGATA GCGTTTGATT TCGAGCGGGC CATTGCTTGG
CAAACATTTC CTCCCGGTAA CGGCTCAATT GCCCAGAGTA GCGGGCAAAC GCACAGCGGC
AGCGGTGCCG TTGAAGTGCG TTATCGCTTT ACTACCGGTG GCAATGATTA TGTGAGCTTC
ACACCACGCG AGGCAATTAC CTTTCCTGCC GGTACAAGTC AGATCGGGTT ATGGGTATAC
GGAGATGGCA GCAGCTTCGA TCTTAAAGTC CAACTGCGCG ACACGCAAGG CGAGATCCTC
CAATACCGCT TAGGCAAGAT CGGCCCTAGC GGTTGGCAGC AATTAGTGAC GGCGATCACC
GGGCCGGTCG AGCCGGGAAA CCAGATTCGT TTTGTGAACG GTCGGCTTGA CGGTGACATT
ACGTTGCAGG CGATAGTGAT CGACGATGAC CCTGATAGCC GAACCGGAGA AGGTGTCGTC
TATCTCGATG ACCTCATCGG TTACAGCGGG CCGGAAGCTT ACGCAGCCCG TTTTGCCGCC
GATCGTGGTG TGGTCGAAGT CGTATGGGCT GTTGATAATG GACAAGTACG CATACCGAGT
GCCGATAGCG AAGTGACGAT TGTTGATCGT GATGGTGGTG AGCGGCGACA GACGGCAGCG
GGGGGTATAT TGACCCTCGA TGTTGGGCCA CGTCCGATCT ACCTGATCTA TCAGCCGGGA
ACTGCATCGG TGCAGCCGCC ATCGCAGCCA TCAACCGGTA GCGGTTTTGT TCCATCCAAT
GGTGCCTTTG CCGATGATGC GATGCGTAAC GTCTGGCAGC GCACCGATCA ACCGGTCGCC
GGTGGTGCGC CTGGGTTGCG TCCGCGTTCG TGGATCTGGG GGCCACAACC GATCAGTGGT
GCGATGCGAG AGCCTTATGC GCAAAGCCCC GGTGGTAGCC GGCTTGTCCA GTATTTCGAC
AAGAGCCGTA TGGAGATCAA CAATCCTAAT GCACCACGCG ACCAATGGTA TGTGACCAAT
GGTTTGTTAG TCGTTGAGAT GCTCACCGGA CGAATCCAAC TTGGTGATAC GCAGTTTGAA
GATCGTACAC CGGCGACGGA AGCTGTAGCA GGTGATCCGG CAAGCGTGAA TCCGAATGCA
CCGACATATG CCACGCTCCG CAGCGTTGCT TTTCCGGTTA ACCCGGCCCG CGCACCTGAC
CGGAACGGTC AAGTAGTGAC TGCTTTTCTC AATCGTGATG GCACCGTCGT TGACCGACCC
GATCTCGCCC GCTATGATGT ACGGATTGGC AGCTATGAAG CTACGCTCGG TCATAACATC
CCCCAAGTCT TTCTCGACTA CTTCGCGCAG CAAGGTGTAG TGCTCGAAAA TGGGCGGTAC
GTTACCCGCC AGATCATTGA TTGGATCTTT GTCATGGGTC TACCGATCAG TGAGCCGTAC
TGGGCACGGG TCAAAGTTGG TGGTGTTGAG AAAGATGTTC TTATGCAGGC GTTTGAACGG
CGAGTCTTGA CCTATACTCC TGATAACGAT CCCAACTGGC GGGTCGAAAT GGGGAATGTT
GGTCAGCACT ACGTGCGCTG GCGATACGGC CCGTAG
 
Protein sequence
MRYIRHLGLW IVLVVLCLNT WSSPVPMVQS ASPSVFGANT HIAASYPFPD SLNRPANVIA 
QSGMGWVREE FQWGRIEPRP GQFDWTFTDR AVNELVKRGI TIVGLLNPAV GWGTPDPADD
YIPPEQGSFY PPDPQLFANF AATVVNRYKD RVRYWQVWNE PDNPVYWRPS PNPAAYAALL
RAVYPAIKGA DPGATVLAAG IVSPEPAGSF LQAIADNGAW GSFDVIALHP YTDPLGPEAG
SIDTVGIGAI QTLAARLGPK PIWVTEFGWA DSPTDRTGEQ SIDPETQANY LIRAMAMLRQ
AGVERVIMYR FKDMQLRNGV PYNAYGLLRY GSGQADYSQF KPAFNAFRTL NQQVGGRQPL
GLRRLSDERI AFDFERAIAW QTFPPGNGSI AQSSGQTHSG SGAVEVRYRF TTGGNDYVSF
TPREAITFPA GTSQIGLWVY GDGSSFDLKV QLRDTQGEIL QYRLGKIGPS GWQQLVTAIT
GPVEPGNQIR FVNGRLDGDI TLQAIVIDDD PDSRTGEGVV YLDDLIGYSG PEAYAARFAA
DRGVVEVVWA VDNGQVRIPS ADSEVTIVDR DGGERRQTAA GGILTLDVGP RPIYLIYQPG
TASVQPPSQP STGSGFVPSN GAFADDAMRN VWQRTDQPVA GGAPGLRPRS WIWGPQPISG
AMREPYAQSP GGSRLVQYFD KSRMEINNPN APRDQWYVTN GLLVVEMLTG RIQLGDTQFE
DRTPATEAVA GDPASVNPNA PTYATLRSVA FPVNPARAPD RNGQVVTAFL NRDGTVVDRP
DLARYDVRIG SYEATLGHNI PQVFLDYFAQ QGVVLENGRY VTRQIIDWIF VMGLPISEPY
WARVKVGGVE KDVLMQAFER RVLTYTPDND PNWRVEMGNV GQHYVRWRYG P