Gene Cagg_0396 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_0396 
Symbol 
ID7268497 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp488693 
End bp489460 
Gene Length768 bp 
Protein Length255 aa 
Translation table11 
GC content60% 
IMG OID643565263 
Productalpha/beta hydrolase fold protein 
Protein accessionYP_002461777 
Protein GI219847344 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.075233 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCATCGA TCACAACCAC AGCCGGTGAC CTGTTTGTGA TGCGACGTGG TACCGCCGGG 
CCGTCGTTAA TTTGTATTCA CGGCGCCGGC GGCAGTGCCC GTCATTGGGG GCTTTTGCTC
GAACCGCTTG CCGCCGTTGC CCAAGTCTAT GCGGTGGATT TACCCGGCCA TGGCCGCTCG
CCACGGATTA ATGAGGTATC AATCACTACC TATACGCAGG TTATTGCCGC ATTGCACACG
GCCCTCGCCT TACCTCCGGC AATTGTCGTC GGGCACTCGA TGGGCGGTGC CATTGCCCTC
CAACTCGCCA TTGAGCAACC ACAGCTCGTA GCCGGTTTAG GCTTGGTGAG TAGTGCGGCC
CGTCTGCGTG TTGCCCCGGC GCTGCTGGCC GGGCTGGCCG GTGATGCTCA ATCCCGCCAT
GAAGCCATGA CAATGCTGGT CACCTGGCTC TTTAGTCCCT ATGCCGATCC GGCACTTCGC
GCCGAAGCTG CCGATGAATA CGCTACCCTC GCCCCAACCG TTCTACTGGC CGATCTCCAG
GCCTGTGATG GGTTTGATGT ACGTTCCAGG CTCGCGGCCA TCCGCTGTCC GGCCCTCGTC
GTTACCGGCA GCGAAGATCG ACTGACACCA CCGAAGCTTG GTGCCGAATT AGCAACCGGT
TTGGGGGTCG CTCATCAGAT CCTCGATGGT GTTGGTCATA TGCCAATGCG TGAAGCGCCG
GAGCGACTCG GTCAACTCTT AAGCACATTC GTCGCAACGT TTGCCTAA
 
Protein sequence
MPSITTTAGD LFVMRRGTAG PSLICIHGAG GSARHWGLLL EPLAAVAQVY AVDLPGHGRS 
PRINEVSITT YTQVIAALHT ALALPPAIVV GHSMGGAIAL QLAIEQPQLV AGLGLVSSAA
RLRVAPALLA GLAGDAQSRH EAMTMLVTWL FSPYADPALR AEAADEYATL APTVLLADLQ
ACDGFDVRSR LAAIRCPALV VTGSEDRLTP PKLGAELATG LGVAHQILDG VGHMPMREAP
ERLGQLLSTF VATFA