Gene Cagg_0392 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_0392 
Symbol 
ID7268493 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp485480 
End bp486829 
Gene Length1350 bp 
Protein Length449 aa 
Translation table11 
GC content56% 
IMG OID643565259 
Producthistidine kinase 
Protein accessionYP_002461773 
Protein GI219847340 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.367455 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATCGAT TAGTTGTCAG ACTCAGTGTG GCCTTTGCCA CACTCATTTT GTTGGTTACA 
GGAATCCTTG CGATAGCAAT TGACCGGCTG GCCGATAGTA GCTTTCGGCG GTATCTGGCC
CAGAATCAGA TTGCCGAGAG CGGTCTGAGT GAGCGTCTGG CGATCTGGTA TGCACAGCAC
GGCAGTTGGG ATGGTGCTGA GCGGTTGTTG TCGGTGGGTG GTATGGGGGG AGGGTATGGT
CAAGGTGGCG CCCAACGCCC ATTGTTAGCA TTGGCCGACG CTACCGGTCG GGTCGTTGCC
GATCCGCATG CGATTGTCGG CGAGTCGCTG AATGCAACCC AACGTCGTGC CGCACTGCCG
ATACTTGTTG ATCAGCAGGT GGTTGGCTAC CTCGTGGTGC AGGCAGCGGG CAATCGATTG
TCGCGGGCAG CCGAACTCTT TCTGCAACGC TTGCGTGACA TTATTTGGAT TACCGGTGGG
ATTGTGGCCC TGACCGGTGC TGTGATCGGG ATCGCTATTG CCCGTCAGCT TGTGCAGCCA
TTGCAGCACG TTGCACTAGC AGTCGACGAG CTACGTCAAG GTCACTTAAC CGCACGGGCC
GTTGTAGAGG GGCCGATAGA GGTCAGGCGT GTCGCCGAGG CATTTAATGC GATGGCGACT
GAATTGGCCG CAGCGAACCA GCAACGACGA CAGATGATCG CCGATATTGC CCACGAATTA
CGCACACCGC TGACGGTTAT CCAAGGGAAC CTACGTGCGA TTCTCGATGA TGTGTATCCG
TTAAGTCGGG AAGAAGTAGG AAAGATTTAT GAAGCAACCG TCGGCTTACG CCGGTTGGTT
GACGATCTCC GTGAATTATC GTTAGCGGAT ACCGGTCAAC TAACGCTCCA TCGTCAGCCG
CTTGATCTCA ATCAACTATT GGCGCGCGAA GCCGCGCTCT TTCGCGAATT AGCGACGGTG
CAGGGGGTTG CTTTGCACGT GACGCTGGCC TCTGAGATAC CGCCGGTGAT AGCCGATGGC
GAACGGATTG CACAGGTGGT ACGGAATCTG TTGAGCAATG CGTTGCGGTA TACACCGGCA
GGCGGGCAAA TTATGGTCAC GAGCACGGCT CACGAGCAAG GTGTCTTGGT CAGTGTGATC
GATACCGGTA GTGGGATCGA ACCGACAGAT ATACCACATA TCTTTGAACG TTTCTACCGG
TCTGACCATG GGCGTAGTCG GGCAAAAGGT GGGAGCGGTT TAGGATTGGC GATTGCCGAG
CGACTTATTG CCTTGCACGG TGGTCAGATT GGGGTCGAGA GCGAGGTCGG TAAAGGGTCG
CGGTTTTGGT TTTGGTTACC GGCAGCGTAG
 
Protein sequence
MNRLVVRLSV AFATLILLVT GILAIAIDRL ADSSFRRYLA QNQIAESGLS ERLAIWYAQH 
GSWDGAERLL SVGGMGGGYG QGGAQRPLLA LADATGRVVA DPHAIVGESL NATQRRAALP
ILVDQQVVGY LVVQAAGNRL SRAAELFLQR LRDIIWITGG IVALTGAVIG IAIARQLVQP
LQHVALAVDE LRQGHLTARA VVEGPIEVRR VAEAFNAMAT ELAAANQQRR QMIADIAHEL
RTPLTVIQGN LRAILDDVYP LSREEVGKIY EATVGLRRLV DDLRELSLAD TGQLTLHRQP
LDLNQLLARE AALFRELATV QGVALHVTLA SEIPPVIADG ERIAQVVRNL LSNALRYTPA
GGQIMVTSTA HEQGVLVSVI DTGSGIEPTD IPHIFERFYR SDHGRSRAKG GSGLGLAIAE
RLIALHGGQI GVESEVGKGS RFWFWLPAA