Gene Cagg_0387 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_0387 
Symbol 
ID7268488 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp479242 
End bp480015 
Gene Length774 bp 
Protein Length257 aa 
Translation table11 
GC content56% 
IMG OID643565255 
ProductUbiA prenyltransferase 
Protein accessionYP_002461769 
Protein GI219847336 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1575] 1,4-dihydroxy-2-naphthoate octaprenyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00875631 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.894158 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATGCGA ATTGGCTTAC CATCATCATC GATCTGATCA AGCTTGGTCG CCCACTACAC 
CTCCTTGGTG GGGCGATCTT TTATGGAATA GGTGTAGCGG CAGCCGGTCC CGAACTACCC
AATAGCTTCC TTGCCGGGCT GGGTCTGGTG ACGGTATTGA GCGCCCAGTT GATGAACCAT
TACAGTAACG ACTATTTCGA CCGAGTGGCC GATGCGCTCA ACTCAACGCC TACCCACTGG
TCGGGTGGTA GTCGGGTGTT GCCGGAAGGA CGCTTACCGG CGCAGGCAGC ACTGATCGCG
GCACTGAGCT GGGGCGGGAT CGCAATCGGT TTGGCTCTCG TGTGTGTGGT GTTGTCGCCT
AACCCGACCC TCAGTACCAT GATTCTCGGT AGTTCCATTC TGCTCGCGTG GGTCTACAGC
GGACCACCCC TCTATTTGCA TCGGCATGGT TGGGGTGAAG TTGTCGGGGC GTGGTTAGTG
CCGGGAGGAA CGGCCATGAC CGGTTTCATT CTGCAAACCG GTACTGTGCA GCCGGTGATC
GGGCTGGTAA TTTTGCCGCT CTGCTTTCTC CAATTTGCTA TGCTGATCGC CGTCAGTTTA
CCGGATGTTG TAGGTGATCG GGCTGCCGGC AAACGCACCC TAGCGGGCGT ATCTCAGTCA
AATCACGCAC TTGGGTGTCG ATCTTACCCC CATCGCATTT CTCTTTTCGG CACCGTTTAT
CATCGTGGGA TTATACCGCT ACCGATTCCT CCACATTGTG CCGATCGCCC GTGA
 
Protein sequence
MHANWLTIII DLIKLGRPLH LLGGAIFYGI GVAAAGPELP NSFLAGLGLV TVLSAQLMNH 
YSNDYFDRVA DALNSTPTHW SGGSRVLPEG RLPAQAALIA ALSWGGIAIG LALVCVVLSP
NPTLSTMILG SSILLAWVYS GPPLYLHRHG WGEVVGAWLV PGGTAMTGFI LQTGTVQPVI
GLVILPLCFL QFAMLIAVSL PDVVGDRAAG KRTLAGVSQS NHALGCRSYP HRISLFGTVY
HRGIIPLPIP PHCADRP