Gene Cagg_0360 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_0360 
Symbol 
ID7268461 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp450097 
End bp450999 
Gene Length903 bp 
Protein Length300 aa 
Translation table11 
GC content58% 
IMG OID643565228 
ProductABC transporter related 
Protein accessionYP_002461742 
Protein GI219847309 
COG category[V] Defense mechanisms 
COG ID[COG1131] ABC-type multidrug transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00137885 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAACGCCA TCGAAACGAT CGATCTCACC AAACGCTACG GCCAACGGCT CGCCGTCGAT 
CAGCTCAATC TCACCGTGAA CAAAGGGGAA GTCTTCGGCT TTCTCGGTCC CAACGGCGCC
GGCAAAACCA CCACGATTGC GATGCTGTTG GGGTTGGTCA AGCCGACGCA CGGGCGCGCA
ATTGTGCTCG GCTACGATGT GCAACGCGAA CCGATGCTGG CACTGCGGCG CGTAGGTGCG
ATGATCGAAG CACCGGCGTT CTACCCATAC CTGAGCGGCG CCGATAACCT GCGGGTATTG
GCGCGCGCCG GTGGGATTGC GCTCGAACGT GTCCCGCAGG TGCTGAAGAT GGTTGAGTTG
AGTGATCGCG CGCGTGATAA GGTAGCGACC TACTCACAAG GAATGAAACA GCGACTGGCG
ATTGCCGCGG CCTTGCTCCC CGACCCCGAG TTGATCATGC TCGACGAACC AACCAACGGC
CTCGATCCGG CGGGGACGGT TGAGATTCGT AACCTGATCC GCGAACTCGC CGCCGGTGGC
CGCACGATCT TGCTCTGTAG CCACTTGTTG CACGAGGTCG AGCAACTGTG TCAGCGCGTA
GCGATTATGA AAGAGGGAAA GCTGATCGCT ACCGGTGAAG TCGCCACCCT GTTGCGACGT
GGGCAGAGTG TGCGGGTGCG AGTAGCAGGT GATCCGGGGC CGGCAGTGAG TATCTTGACC
ACGTTACCTT GGGTTGGTAG TGTTACCGTC CAAGGTGATG CCATTTTGAT CGATACCTCC
ACCGAACGGA CTGCTGAGAT TAATACCTTG CTGATTAAAG CCGGCATTGT GGTCGCCGAG
ATCGGCGCCG GTATGAATTC GCTGGAAGAG TTTTTCTTGA CGGTAACCAA AGCCGAGCCA
TAA
 
Protein sequence
MNAIETIDLT KRYGQRLAVD QLNLTVNKGE VFGFLGPNGA GKTTTIAMLL GLVKPTHGRA 
IVLGYDVQRE PMLALRRVGA MIEAPAFYPY LSGADNLRVL ARAGGIALER VPQVLKMVEL
SDRARDKVAT YSQGMKQRLA IAAALLPDPE LIMLDEPTNG LDPAGTVEIR NLIRELAAGG
RTILLCSHLL HEVEQLCQRV AIMKEGKLIA TGEVATLLRR GQSVRVRVAG DPGPAVSILT
TLPWVGSVTV QGDAILIDTS TERTAEINTL LIKAGIVVAE IGAGMNSLEE FFLTVTKAEP